RNA–Protein interactions for RNA: ENST00000526204.5

VPS28-205, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,120 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-205ENST00000526204 ICAM5Q9UMF0 924 aa19.51■□□□□ 0.71
VPS28-205ENST00000526204 BOLA1Q9Y3E2 137 aa19.51■□□□□ 0.71
VPS28-205ENST00000526204 IER3IP1Q9Y5U9 82 aa19.51■□□□□ 0.71
VPS28-205ENST00000526204 A0A087WUJ7 227 aa19.51■□□□□ 0.71
VPS28-205ENST00000526204 NOTOA8MTQ0 251 aa19.51■□□□□ 0.71
VPS28-205ENST00000526204 AGRPO00253 132 aa19.51■□□□□ 0.71
VPS28-205ENST00000526204 C1QBP02746 253 aa19.51■□□□□ 0.71
VPS28-205ENST00000526204 AHCYP23526 432 aa19.51■□□□□ 0.71
VPS28-205ENST00000526204 FAPQ12884 760 aa19.51■□□□□ 0.71
VPS28-205ENST00000526204 GRPEL2Q8TAA5 225 aa19.51■□□□□ 0.71
VPS28-205ENST00000526204 ABRACLQ9P1F3 81 aa19.51■□□□□ 0.71
VPS28-205ENST00000526204 HCN3Q9P1Z3 774 aa19.51■□□□□ 0.71
VPS28-205ENST00000526204 ARHGEF17Q96PE2 2063 aaPredicted RBP19.5■□□□□ 0.71
VPS28-205ENST00000526204 GATBO75879 557 aaKnown RBP19.5■□□□□ 0.71
VPS28-205ENST00000526204 CSTAP01040 98 aa19.5■□□□□ 0.71
VPS28-205ENST00000526204 RACK1P63244 317 aaKnown RBP19.5■□□□□ 0.71
VPS28-205ENST00000526204 SIRPAP78324 504 aa19.5■□□□□ 0.71
VPS28-205ENST00000526204 FZD2Q14332 565 aa19.5■□□□□ 0.71
VPS28-205ENST00000526204 ZNF267Q14586 743 aaPredicted RBP19.5■□□□□ 0.71
VPS28-205ENST00000526204 CDK5R1Q15078 307 aa19.5■□□□□ 0.71
VPS28-205ENST00000526204 RAB30Q15771 203 aa19.5■□□□□ 0.71
VPS28-205ENST00000526204 CDONQ4KMG0 1287 aa19.5■□□□□ 0.71
VPS28-205ENST00000526204 TP53I3Q53FA7 332 aa19.5■□□□□ 0.71
VPS28-205ENST00000526204 KIAA0895LQ68EN5 471 aa19.5■□□□□ 0.71
VPS28-205ENST00000526204 NPSR1Q6W5P4 371 aa19.5■□□□□ 0.71
VPS28-205ENST00000526204 SLC35F2Q8IXU6 374 aa19.5■□□□□ 0.71
VPS28-205ENST00000526204 GPR135Q8IZ08 494 aa19.5■□□□□ 0.71
VPS28-205ENST00000526204 SNX33Q8WV41 574 aa19.5■□□□□ 0.71
VPS28-205ENST00000526204 PELI1Q96FA3 418 aa19.5■□□□□ 0.71
VPS28-205ENST00000526204 SPACA7Q96KW9 195 aa19.5■□□□□ 0.71
VPS28-205ENST00000526204 ABCG5Q9H222 651 aa19.5■□□□□ 0.71
VPS28-205ENST00000526204 ZCCHC4Q9H5U6 513 aa19.5■□□□□ 0.71
VPS28-205ENST00000526204 PRTFDC1Q9NRG1 225 aa19.5■□□□□ 0.71
VPS28-205ENST00000526204 PLSCR3Q9NRY6 295 aa19.5■□□□□ 0.71
VPS28-205ENST00000526204 COL4A2P08572 1712 aa19.5■□□□□ 0.71
VPS28-205ENST00000526204 LRP4O75096 1905 aa19.5■□□□□ 0.71
VPS28-205ENST00000526204 A0A1W2PRG6 482 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 MCIDASD6RGH6 385 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 LANCL1O43813 399 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 PAHP00439 452 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 TFP02787 698 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 CTSBP07858 339 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 THEGLP0DJG4 465 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 RPL4P36578 427 aaKnown RBP19.49■□□□□ 0.71
VPS28-205ENST00000526204 GPR3P46089 330 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 GZMKP49863 264 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 GDI2P50395 445 aaKnown RBP19.49■□□□□ 0.71
VPS28-205ENST00000526204 BLKP51451 505 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 FAM53BQ14153 422 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 ISXQ2M1V0 245 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 SLC25A35Q3KQZ1 300 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 CCDC58Q4VC31 144 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 PLA1AQ53H76 456 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 SLC35D3Q5M8T2 416 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 RPL22L1Q6P5R6 122 aaKnown RBP19.49■□□□□ 0.71
VPS28-205ENST00000526204 ASB18Q6ZVZ8 466 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 OR14A16Q8NHC5 309 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 ZFAND1Q8TCF1 268 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 ZDHHC1Q8WTX9 485 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 AKAP1Q92667 903 aaKnown RBP eCLIP19.49■□□□□ 0.71
VPS28-205ENST00000526204 GON7Q9BXV9 100 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 DTX4Q9Y2E6 619 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 ZNF337Q9Y3M9 751 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 XIRP2A4UGR9 3374 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.49■□□□□ 0.71
VPS28-205ENST00000526204 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.49■□□□□ 0.71
VPS28-205ENST00000526204 SERINC4A6NH21 518 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 TGFBR3LH3BV60 316 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 HRKO00198 91 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 ARPC3O15145 178 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 FLRT2O43155 660 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 DIO1P49895 249 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 PITPNAQ00169 270 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 PLCZ1Q86YW0 608 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 ZNF440Q8IYI8 595 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 AVL9Q8NBF6 648 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 ABHD1Q96SE0 405 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 SLC19A3Q9BZV2 496 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 OR10H1Q9Y4A9 318 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 CACNG2Q9Y698 323 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 SCN2AQ99250 2005 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 CEP290O15078 2479 aa19.49■□□□□ 0.71
VPS28-205ENST00000526204 GNB5O14775 395 aa19.48■□□□□ 0.71
VPS28-205ENST00000526204 EEF1E1O43324 174 aaKnown RBP19.48■□□□□ 0.71
VPS28-205ENST00000526204 CT45A8P0DMV1 189 aa19.48■□□□□ 0.71
VPS28-205ENST00000526204 CT45A9P0DMV2 189 aa19.48■□□□□ 0.71
VPS28-205ENST00000526204 TFPIP10646 304 aa19.48■□□□□ 0.71
VPS28-205ENST00000526204 AGFG1P52594 562 aaKnown RBP19.48■□□□□ 0.71
VPS28-205ENST00000526204 MAB21L1Q13394 359 aa19.48■□□□□ 0.71
VPS28-205ENST00000526204 EFR3AQ14156 821 aa19.48■□□□□ 0.71
VPS28-205ENST00000526204 CT45A2Q5DJT8 189 aa19.48■□□□□ 0.71
VPS28-205ENST00000526204 OR6C4Q8NGE1 309 aa19.48■□□□□ 0.71
VPS28-205ENST00000526204 PHYHIPQ92561 330 aa19.48■□□□□ 0.71
VPS28-205ENST00000526204 CCNL2Q96S94 520 aaPredicted RBP19.48■□□□□ 0.71
VPS28-205ENST00000526204 GPR27Q9NS67 375 aa19.48■□□□□ 0.71
VPS28-205ENST00000526204 MCUBQ9NWR8 336 aa19.48■□□□□ 0.71
VPS28-205ENST00000526204 TEKT2Q9UIF3 430 aa19.48■□□□□ 0.71
VPS28-205ENST00000526204 CD207Q9UJ71 328 aa19.48■□□□□ 0.71
VPS28-205ENST00000526204 SZT2Q5T011 3432 aa19.48■□□□□ 0.71
VPS28-205ENST00000526204 FOXS1O43638 330 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms