RNA–Protein interactions for RNA: ENST00000525076.5

CTSB-208, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-208ENST00000525076 NAA11Q9BSU3 229 aaPredicted RBP13.34□□□□□ -0.27
CTSB-208ENST00000525076 OR11A1Q9GZK7 315 aa13.34□□□□□ -0.27
CTSB-208ENST00000525076 SHARPINQ9H0F6 387 aa13.34□□□□□ -0.27
CTSB-208ENST00000525076 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.34□□□□□ -0.27
CTSB-208ENST00000525076 ASIC5Q9NY37 505 aa13.34□□□□□ -0.27
CTSB-208ENST00000525076 TMEM181Q9P2C4 612 aa13.34□□□□□ -0.27
CTSB-208ENST00000525076 TRAPPC4Q9Y296 219 aa13.34□□□□□ -0.27
CTSB-208ENST00000525076 AMDHD2Q9Y303 409 aa13.34□□□□□ -0.27
CTSB-208ENST00000525076 EIF1BO60739 113 aaKnown RBP13.33□□□□□ -0.28
CTSB-208ENST00000525076 ITGA5P08648 1049 aa13.33□□□□□ -0.28
CTSB-208ENST00000525076 CCNA2P20248 432 aa13.33□□□□□ -0.28
CTSB-208ENST00000525076 UQCRC2P22695 453 aa13.33□□□□□ -0.28
CTSB-208ENST00000525076 NTF4P34130 210 aa13.33□□□□□ -0.28
CTSB-208ENST00000525076 IDH2P48735 452 aaKnown RBP13.33□□□□□ -0.28
CTSB-208ENST00000525076 EFNA4P52798 201 aa13.33□□□□□ -0.28
CTSB-208ENST00000525076 SLC35A1P78382 337 aa13.33□□□□□ -0.28
CTSB-208ENST00000525076 KCNJ10P78508 379 aa13.33□□□□□ -0.28
CTSB-208ENST00000525076 SMU1Q2TAY7 513 aa13.33□□□□□ -0.28
CTSB-208ENST00000525076 ANXA8L1Q5VT79 327 aa13.33□□□□□ -0.28
CTSB-208ENST00000525076 C9orf135Q5VTT2 229 aa13.33□□□□□ -0.28
CTSB-208ENST00000525076 EMBQ6PCB8 327 aa13.33□□□□□ -0.28
CTSB-208ENST00000525076 ADGRG3Q86Y34 549 aa13.33□□□□□ -0.28
CTSB-208ENST00000525076 OR52E4Q8NGH9 312 aa13.33□□□□□ -0.28
CTSB-208ENST00000525076 C10orf105Q8TEF2 133 aa13.33□□□□□ -0.28
CTSB-208ENST00000525076 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.33□□□□□ -0.282e-8■□□□□ 11
CTSB-208ENST00000525076 RAB8BQ92930 207 aa13.33□□□□□ -0.28
CTSB-208ENST00000525076 ROPN1LQ96C74 230 aa13.33□□□□□ -0.28
CTSB-208ENST00000525076 DDIT4LQ96D03 193 aa13.33□□□□□ -0.28
CTSB-208ENST00000525076 ZIM3Q96PE6 472 aa13.33□□□□□ -0.28
CTSB-208ENST00000525076 DPY30Q9C005 99 aa13.33□□□□□ -0.28
CTSB-208ENST00000525076 SAP130Q9H0E3 1048 aa13.33□□□□□ -0.28
CTSB-208ENST00000525076 EXOSC3Q9NQT5 275 aaKnown RBP13.33□□□□□ -0.28
CTSB-208ENST00000525076 DCTN4Q9UJW0 460 aa13.33□□□□□ -0.28
CTSB-208ENST00000525076 SLC9A8Q9Y2E8 581 aa13.33□□□□□ -0.28
CTSB-208ENST00000525076 PRSS51A0A1B0GVH4 220 aa13.32□□□□□ -0.28
CTSB-208ENST00000525076 PDLIM1O00151 329 aa13.32□□□□□ -0.28
CTSB-208ENST00000525076 BCAS1O75363 584 aaPredicted RBP13.32□□□□□ -0.28
CTSB-208ENST00000525076 CPSF4O95639 269 aaKnown RBP13.32□□□□□ -0.28
CTSB-208ENST00000525076 F12P00748 615 aaPredicted RBP13.32□□□□□ -0.28
CTSB-208ENST00000525076 NUDT17P0C025 328 aa13.32□□□□□ -0.28
CTSB-208ENST00000525076 USF1P22415 310 aaPredicted RBP13.32□□□□□ -0.28
CTSB-208ENST00000525076 APOBEC3AP31941 199 aaPredicted RBP13.32□□□□□ -0.28
CTSB-208ENST00000525076 KHKP50053 298 aa13.32□□□□□ -0.28
CTSB-208ENST00000525076 FOXG1P55316 489 aaPredicted RBP13.32□□□□□ -0.28
CTSB-208ENST00000525076 H3F3AP84243 136 aa13.32□□□□□ -0.28
CTSB-208ENST00000525076 IFFO1Q0D2I5 559 aa13.32□□□□□ -0.28
CTSB-208ENST00000525076 GPAT3Q53EU6 434 aa13.32□□□□□ -0.28
CTSB-208ENST00000525076 C1QTNF12Q5T7M4 302 aa13.32□□□□□ -0.28
CTSB-208ENST00000525076 FRRS1Q6ZNA5 592 aa13.32□□□□□ -0.28
CTSB-208ENST00000525076 ANKRD46Q86W74 232 aa13.32□□□□□ -0.28
CTSB-208ENST00000525076 C1orf162Q8NEQ5 155 aaPredicted RBP13.32□□□□□ -0.28
CTSB-208ENST00000525076 PMM1Q92871 262 aa13.32□□□□□ -0.28
CTSB-208ENST00000525076 AMBRA1Q9C0C7 1298 aa13.32□□□□□ -0.28
CTSB-208ENST00000525076 SLC17A5Q9NRA2 495 aa13.32□□□□□ -0.28
CTSB-208ENST00000525076 FLVCR1Q9Y5Y0 555 aa13.32□□□□□ -0.28
CTSB-208ENST00000525076 MALRD1Q5VYJ5 2156 aa13.32□□□□□ -0.28
CTSB-208ENST00000525076 TMED7-TICAM2A0A0A6YYA0 188 aa13.31□□□□□ -0.28
CTSB-208ENST00000525076 ZNF208O43345 1280 aa13.31□□□□□ -0.28
CTSB-208ENST00000525076 WNT11O96014 354 aa13.31□□□□□ -0.28
CTSB-208ENST00000525076 BPGMP07738 259 aa13.31□□□□□ -0.28
CTSB-208ENST00000525076 IGHV4-31P0DP07 118 aa13.31□□□□□ -0.28
CTSB-208ENST00000525076 UQCRBP14927 111 aa13.31□□□□□ -0.28
CTSB-208ENST00000525076 ZNF16P17020 682 aaPredicted RBP13.31□□□□□ -0.28
CTSB-208ENST00000525076 CHI3L1P36222 383 aaPredicted RBP13.31□□□□□ -0.28
CTSB-208ENST00000525076 POLR2HP52434 150 aaKnown RBP13.31□□□□□ -0.28
CTSB-208ENST00000525076 MAP2K6P52564 334 aa13.31□□□□□ -0.28
CTSB-208ENST00000525076 PHC1P78364 1004 aa13.31□□□□□ -0.28
CTSB-208ENST00000525076 LSM11P83369 360 aaKnown RBP eCLIP13.31□□□□□ -0.283e-6■□□□□ 9.5
CTSB-208ENST00000525076 PDCD2Q16342 344 aaPredicted RBP13.31□□□□□ -0.28
CTSB-208ENST00000525076 AP1ARQ63HQ0 302 aa13.31□□□□□ -0.28
CTSB-208ENST00000525076 SAXO2Q658L1 398 aa13.31□□□□□ -0.28
CTSB-208ENST00000525076 KLHL24Q6TFL4 600 aa13.31□□□□□ -0.28
CTSB-208ENST00000525076 HMGN2P46Q86SG4 172 aa13.31□□□□□ -0.28
CTSB-208ENST00000525076 WDR31Q8NA23 367 aa13.31□□□□□ -0.28
CTSB-208ENST00000525076 ZG16BQ96DA0 208 aa13.31□□□□□ -0.28
CTSB-208ENST00000525076 NEURL3Q96EH8 262 aa13.31□□□□□ -0.28
CTSB-208ENST00000525076 PPP1R36Q96LQ0 422 aa13.31□□□□□ -0.28
CTSB-208ENST00000525076 SLC7A10Q9NS82 523 aa13.31□□□□□ -0.28
CTSB-208ENST00000525076 MARCOQ9UEW3 520 aaPredicted RBP13.31□□□□□ -0.28
CTSB-208ENST00000525076 LGALS13Q9UHV8 139 aa13.31□□□□□ -0.28
CTSB-208ENST00000525076 TMED7Q9Y3B3 224 aa13.31□□□□□ -0.28
CTSB-208ENST00000525076 FKBP7Q9Y680 259 aa13.31□□□□□ -0.28
CTSB-208ENST00000525076 ARFGEF3Q5TH69 2177 aa13.31□□□□□ -0.28
CTSB-208ENST00000525076 CLDN24A6NM45 220 aa13.3□□□□□ -0.28
CTSB-208ENST00000525076 LMX1BO60663 402 aa13.3□□□□□ -0.28
CTSB-208ENST00000525076 SCN2BO60939 215 aa13.3□□□□□ -0.28
CTSB-208ENST00000525076 MPGP29372 298 aa13.3□□□□□ -0.28
CTSB-208ENST00000525076 GZMKP49863 264 aa13.3□□□□□ -0.28
CTSB-208ENST00000525076 PDLIM4P50479 330 aa13.3□□□□□ -0.28
CTSB-208ENST00000525076 PRPS1P60891 318 aa13.3□□□□□ -0.28
CTSB-208ENST00000525076 FUT5Q11128 374 aa13.3□□□□□ -0.28
CTSB-208ENST00000525076 SLC17A1Q14916 467 aa13.3□□□□□ -0.28
CTSB-208ENST00000525076 TSPO2Q5TGU0 170 aa13.3□□□□□ -0.28
CTSB-208ENST00000525076 NUDCD3Q8IVD9 361 aa13.3□□□□□ -0.28
CTSB-208ENST00000525076 CMIPQ8IY22 773 aa13.3□□□□□ -0.28
CTSB-208ENST00000525076 TESCQ96BS2 214 aa13.3□□□□□ -0.28
CTSB-208ENST00000525076 SLC35A5Q9BS91 424 aa13.3□□□□□ -0.28
CTSB-208ENST00000525076 PIMREGQ9BSJ6 248 aa13.3□□□□□ -0.28
CTSB-208ENST00000525076 AKTIPQ9H8T0 292 aa13.3□□□□□ -0.28
CTSB-208ENST00000525076 OSGIN1Q9UJX0 560 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms