RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 SLC16A1P53985 500 aa18.6■□□□□ 0.57
TRAPPC9-215ENST00000524162 KRTAP10-9P60411 292 aa18.6■□□□□ 0.57
TRAPPC9-215ENST00000524162 FAM27E3Q08E93 113 aa18.6■□□□□ 0.57
TRAPPC9-215ENST00000524162 PTOV1Q86YD1 416 aa18.6■□□□□ 0.57
TRAPPC9-215ENST00000524162 OR8J3Q8NGG0 315 aa18.6■□□□□ 0.57
TRAPPC9-215ENST00000524162 ARL5BQ96KC2 179 aa18.6■□□□□ 0.57
TRAPPC9-215ENST00000524162 USB1Q9BQ65 265 aaKnown RBP18.6■□□□□ 0.57
TRAPPC9-215ENST00000524162 CLEC4AQ9UMR7 237 aa18.6■□□□□ 0.57
TRAPPC9-215ENST00000524162 ANGPT4Q9Y264 503 aa18.6■□□□□ 0.57
TRAPPC9-215ENST00000524162 C8BP07358 591 aa18.59■□□□□ 0.57
TRAPPC9-215ENST00000524162 GKN3PP0CG01 181 aa18.59■□□□□ 0.57
TRAPPC9-215ENST00000524162 CXCR1P25024 350 aa18.59■□□□□ 0.57
TRAPPC9-215ENST00000524162 SLC35A1P78382 337 aa18.59■□□□□ 0.57
TRAPPC9-215ENST00000524162 RASGEF1BQ0VAM2 473 aa18.59■□□□□ 0.57
TRAPPC9-215ENST00000524162 C6orf89Q6UWU4 347 aa18.59■□□□□ 0.57
TRAPPC9-215ENST00000524162 TMEM200AQ86VY9 491 aa18.59■□□□□ 0.57
TRAPPC9-215ENST00000524162 TUSC5Q8IXB3 177 aa18.59■□□□□ 0.57
TRAPPC9-215ENST00000524162 PCYOX1LQ8NBM8 494 aa18.59■□□□□ 0.57
TRAPPC9-215ENST00000524162 LINC01560Q8TB33 94 aa18.59■□□□□ 0.57
TRAPPC9-215ENST00000524162 PIGXQ8TBF5 258 aa18.59■□□□□ 0.57
TRAPPC9-215ENST00000524162 LRRC58Q96CX6 371 aa18.59■□□□□ 0.57
TRAPPC9-215ENST00000524162 HDHD5Q9BXW7 423 aa18.59■□□□□ 0.57
TRAPPC9-215ENST00000524162 PIF1Q9H611 641 aa18.59■□□□□ 0.57
TRAPPC9-215ENST00000524162 ZNF226Q9NYT6 803 aa18.59■□□□□ 0.57
TRAPPC9-215ENST00000524162 EMC3Q9P0I2 261 aa18.59■□□□□ 0.57
TRAPPC9-215ENST00000524162 EDARQ9UNE0 448 aa18.59■□□□□ 0.57
TRAPPC9-215ENST00000524162 GPR52Q9Y2T5 361 aa18.59■□□□□ 0.57
TRAPPC9-215ENST00000524162 PRR14LQ5THK1 2151 aa18.59■□□□□ 0.57
TRAPPC9-215ENST00000524162 AKAP9Q99996 3911 aa18.58■□□□□ 0.57
TRAPPC9-215ENST00000524162 GPR171O14626 319 aa18.58■□□□□ 0.56
TRAPPC9-215ENST00000524162 NPIPB7O75200 414 aa18.58■□□□□ 0.56
TRAPPC9-215ENST00000524162 FESP07332 822 aa18.58■□□□□ 0.56
TRAPPC9-215ENST00000524162 PRG2P13727 222 aa18.58■□□□□ 0.56
TRAPPC9-215ENST00000524162 CCKARP32238 428 aa18.58■□□□□ 0.56
TRAPPC9-215ENST00000524162 KCNJ5P48544 419 aa18.58■□□□□ 0.56
TRAPPC9-215ENST00000524162 SNTB1Q13884 538 aaKnown RBP18.58■□□□□ 0.56
TRAPPC9-215ENST00000524162 P2RY6Q15077 328 aa18.58■□□□□ 0.56
TRAPPC9-215ENST00000524162 CYP51A1Q16850 503 aa18.58■□□□□ 0.56
TRAPPC9-215ENST00000524162 INTS11Q5TA45 600 aaKnown RBP18.58■□□□□ 0.56
TRAPPC9-215ENST00000524162 NANOGP8Q6NSW7 305 aa18.58■□□□□ 0.56
TRAPPC9-215ENST00000524162 PAQR6Q6TCH4 344 aa18.58■□□□□ 0.56
TRAPPC9-215ENST00000524162 C5orf46Q6UWT4 87 aa18.58■□□□□ 0.56
TRAPPC9-215ENST00000524162 TFAP2EQ6VUC0 442 aa18.58■□□□□ 0.56
TRAPPC9-215ENST00000524162 STK35Q8TDR2 534 aa18.58■□□□□ 0.56
TRAPPC9-215ENST00000524162 C3orf49Q96BT1 292 aa18.58■□□□□ 0.56
TRAPPC9-215ENST00000524162 RSPO3Q9BXY4 272 aaPredicted RBP18.58■□□□□ 0.56
TRAPPC9-215ENST00000524162 OR11A1Q9GZK7 315 aa18.58■□□□□ 0.56
TRAPPC9-215ENST00000524162 NANOGQ9H9S0 305 aa18.58■□□□□ 0.56
TRAPPC9-215ENST00000524162 KLHL28Q9NXS3 571 aa18.58■□□□□ 0.56
TRAPPC9-215ENST00000524162 CAPN7Q9Y6W3 813 aa18.58■□□□□ 0.56
TRAPPC9-215ENST00000524162 ROS1P08922 2347 aa18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 MAP1AP78559 2803 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 TMEM72A0PK05 275 aa18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 ZNF716A6NP11 495 aa18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 A8MVM7 634 aa18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 TMEM229AB2RXF0 380 aa18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 FXYD1O00168 92 aa18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 CASKO14936 926 aa18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 CCDC22O60826 627 aa18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 FZD7O75084 574 aa18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 MFN2O95140 757 aa18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 OR3A2P47893 321 aa18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 GZMMP51124 257 aa18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 MTPNP58546 118 aa18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 MMEL1Q495T6 779 aa18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 STAC2Q6ZMT1 411 aa18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 PATL1Q86TB9 770 aaKnown RBP18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 ATG4DQ86TL0 474 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 ARMC8Q8IUR7 673 aa18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 GABRG1Q8N1C3 465 aa18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 RP9Q8TA86 221 aaKnown RBP18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 DNAJA4Q8WW22 397 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 NAA11Q9BSU3 229 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 POLDIP3Q9BY77 421 aaKnown RBP18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 TRIM2Q9C040 744 aa18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 CLEC4MQ9H2X3 399 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 GID8Q9NWU2 228 aa18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 TESQ9UGI8 421 aaKnown RBP18.57■□□□□ 0.56
TRAPPC9-215ENST00000524162 ENO4A6NNW6 628 aa18.56■□□□□ 0.56
TRAPPC9-215ENST00000524162 FMO6PO60774 539 aa18.56■□□□□ 0.56
TRAPPC9-215ENST00000524162 GPIP06744 558 aa18.56■□□□□ 0.56
TRAPPC9-215ENST00000524162 CRYGSP22914 178 aa18.56■□□□□ 0.56
TRAPPC9-215ENST00000524162 PCGF2P35227 344 aa18.56■□□□□ 0.56
TRAPPC9-215ENST00000524162 FAM91A1Q658Y4 838 aa18.56■□□□□ 0.56
TRAPPC9-215ENST00000524162 CCDC80Q76M96 950 aa18.56■□□□□ 0.56
TRAPPC9-215ENST00000524162 SSX8Q7RTT4 187 aa18.56■□□□□ 0.56
TRAPPC9-215ENST00000524162 NUFIP2Q7Z417 695 aaKnown RBP18.56■□□□□ 0.56
TRAPPC9-215ENST00000524162 GALNT5Q7Z7M9 940 aa18.56■□□□□ 0.56
TRAPPC9-215ENST00000524162 CADM2Q8N3J6 435 aa18.56■□□□□ 0.56
TRAPPC9-215ENST00000524162 RASSF5Q8WWW0 418 aa18.56■□□□□ 0.56
TRAPPC9-215ENST00000524162 NINJ1Q92982 152 aa18.56■□□□□ 0.56
TRAPPC9-215ENST00000524162 WFIKKN1Q96NZ8 548 aa18.56■□□□□ 0.56
TRAPPC9-215ENST00000524162 GPATCH1Q9BRR8 931 aaKnown RBP18.56■□□□□ 0.56
TRAPPC9-215ENST00000524162 AP3M1Q9Y2T2 418 aa18.56■□□□□ 0.56
TRAPPC9-215ENST00000524162 CELSR1Q9NYQ6 3014 aa18.56■□□□□ 0.56
TRAPPC9-215ENST00000524162 IGHV3-15A0A0B4J1V0 119 aa18.55■□□□□ 0.56
TRAPPC9-215ENST00000524162 LIPT2A6NK58 231 aa18.55■□□□□ 0.56
TRAPPC9-215ENST00000524162 MRASO14807 208 aa18.55■□□□□ 0.56
TRAPPC9-215ENST00000524162 GCM2O75603 506 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC9-215ENST00000524162 HRGP04196 525 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms