RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 EVX1P49640 407 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 CCR4P51679 360 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 CDH13P55290 713 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 SESN3P58005 492 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 UBE2NP61088 152 aaKnown RBP11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 POU6F2P78424 691 aaPredicted RBP11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 H3F3AP84243 136 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 ZNF763Q0D2J5 394 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 CBFBQ13951 182 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 VAX1Q5SQQ9 334 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 REP15Q6BDI9 236 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 KLC3Q6P597 504 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 ZNF662Q6ZS27 426 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 SPATC1Q76KD6 591 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 TMCO5AQ8N6Q1 288 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 PYROXD1Q8WU10 500 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 ST8SIA1Q92185 356 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 BCL2L2Q92843 193 aaPredicted RBP11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 C16orf58Q96GQ5 468 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 ARL5BQ96KC2 179 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 MS4A4EQ96PG1 132 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 BTBD2Q9BX70 525 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 MRPL37Q9BZE1 423 aaKnown RBP11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 TMEM45AQ9NWC5 275 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 SIRT5Q9NXA8 310 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 PLEK2Q9NYT0 353 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 NUP50Q9UKX7 468 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 CMAHPQ9Y471 501 aa11.87□□□□□ -0.51
NKX3-1-202ENST00000523261 SLC22A31A6NKX4 558 aa11.86□□□□□ -0.51
NKX3-1-202ENST00000523261 NPIPB9F8W1W9 429 aa11.86□□□□□ -0.51
NKX3-1-202ENST00000523261 EIF4E2O60573 245 aaKnown RBP11.86□□□□□ -0.51
NKX3-1-202ENST00000523261 DNAJA2O60884 412 aa11.86□□□□□ -0.51
NKX3-1-202ENST00000523261 LGI1O95970 557 aa11.86□□□□□ -0.51
NKX3-1-202ENST00000523261 IGHV2-5P01817 119 aa11.86□□□□□ -0.51
NKX3-1-202ENST00000523261 KRT6AP02538 564 aa11.86□□□□□ -0.51
NKX3-1-202ENST00000523261 PRB2P02812 416 aaPredicted RBP11.86□□□□□ -0.51
NKX3-1-202ENST00000523261 KRT6BP04259 564 aa11.86□□□□□ -0.51
NKX3-1-202ENST00000523261 ALOX5P09917 674 aa11.86□□□□□ -0.51
NKX3-1-202ENST00000523261 KRT6CP48668 564 aa11.86□□□□□ -0.51
NKX3-1-202ENST00000523261 KRTAP10-3P60369 221 aa11.86□□□□□ -0.51
NKX3-1-202ENST00000523261 MERTKQ12866 999 aa11.86□□□□□ -0.51
NKX3-1-202ENST00000523261 SNTB2Q13425 540 aaKnown RBP11.86□□□□□ -0.51
NKX3-1-202ENST00000523261 AVPI1Q5T686 147 aa11.86□□□□□ -0.51
NKX3-1-202ENST00000523261 RELL1Q8IUW5 271 aa11.86□□□□□ -0.51
NKX3-1-202ENST00000523261 POMGNT2Q8NAT1 580 aa11.86□□□□□ -0.51
NKX3-1-202ENST00000523261 ACTRT1Q8TDG2 376 aa11.86□□□□□ -0.51
NKX3-1-202ENST00000523261 ZNF483Q8TF39 744 aaPredicted RBP11.86□□□□□ -0.51
NKX3-1-202ENST00000523261 JADE3Q92613 823 aa11.86□□□□□ -0.51
NKX3-1-202ENST00000523261 TMEM45BQ96B21 275 aa11.86□□□□□ -0.51
NKX3-1-202ENST00000523261 HOXD1Q9GZZ0 328 aa11.86□□□□□ -0.51
NKX3-1-202ENST00000523261 BEX1Q9HBH7 125 aa11.86□□□□□ -0.51
NKX3-1-202ENST00000523261 TESQ9UGI8 421 aaKnown RBP11.86□□□□□ -0.51
NKX3-1-202ENST00000523261 ZNF264O43296 627 aa11.85□□□□□ -0.51
NKX3-1-202ENST00000523261 GPC1P35052 558 aa11.85□□□□□ -0.51
NKX3-1-202ENST00000523261 ALDH3B1P43353 468 aa11.85□□□□□ -0.51
NKX3-1-202ENST00000523261 HTR6P50406 440 aa11.85□□□□□ -0.51
NKX3-1-202ENST00000523261 SEC24CP53992 1094 aa11.85□□□□□ -0.51
NKX3-1-202ENST00000523261 MVKQ03426 396 aa11.85□□□□□ -0.51
NKX3-1-202ENST00000523261 BTKQ06187 659 aa11.85□□□□□ -0.51
NKX3-1-202ENST00000523261 DAG1Q14118 895 aa11.85□□□□□ -0.51
NKX3-1-202ENST00000523261 SLC17A1Q14916 467 aa11.85□□□□□ -0.51
NKX3-1-202ENST00000523261 KLF17Q5JT82 389 aaPredicted RBP11.85□□□□□ -0.51
NKX3-1-202ENST00000523261 KPRPQ5T749 579 aaPredicted RBP11.85□□□□□ -0.51
NKX3-1-202ENST00000523261 ZCCHC12Q6PEW1 402 aa11.85□□□□□ -0.51
NKX3-1-202ENST00000523261 C16orf87Q6PH81 154 aa11.85□□□□□ -0.51
NKX3-1-202ENST00000523261 SZRD1Q7Z422 152 aa11.85□□□□□ -0.51
NKX3-1-202ENST00000523261 MAGEE2Q8TD90 523 aaPredicted RBP11.85□□□□□ -0.51
NKX3-1-202ENST00000523261 CDS1Q92903 461 aa11.85□□□□□ -0.51
NKX3-1-202ENST00000523261 POP5Q969H6 163 aaKnown RBP11.85□□□□□ -0.51
NKX3-1-202ENST00000523261 ZNF317Q96PQ6 595 aaPredicted RBP11.85□□□□□ -0.51
NKX3-1-202ENST00000523261 THUMPD3Q9BV44 507 aaKnown RBP11.85□□□□□ -0.51
NKX3-1-202ENST00000523261 NELFAQ9H3P2 528 aa11.85□□□□□ -0.51
NKX3-1-202ENST00000523261 NOX3Q9HBY0 568 aa11.85□□□□□ -0.51
NKX3-1-202ENST00000523261 MOV10Q9HCE1 1003 aaKnown RBP11.85□□□□□ -0.51
NKX3-1-202ENST00000523261 TMCO1Q9UM00 188 aa11.85□□□□□ -0.51
NKX3-1-202ENST00000523261 HDGFL3Q9Y3E1 203 aa11.85□□□□□ -0.51
NKX3-1-202ENST00000523261 DTNAQ9Y4J8 743 aa11.85□□□□□ -0.51
NKX3-1-202ENST00000523261 A0A096LPE4 126 aa11.84□□□□□ -0.51
NKX3-1-202ENST00000523261 A0A096LPK6 155 aa11.84□□□□□ -0.51
NKX3-1-202ENST00000523261 A0A1W2PPZ6 126 aa11.84□□□□□ -0.51
NKX3-1-202ENST00000523261 C3orf80F5H4A9 247 aa11.84□□□□□ -0.51
NKX3-1-202ENST00000523261 G3V4G9 280 aa11.84□□□□□ -0.51
NKX3-1-202ENST00000523261 ULK1O75385 1050 aa11.84□□□□□ -0.51
NKX3-1-202ENST00000523261 UBL4AP11441 157 aa11.84□□□□□ -0.51
NKX3-1-202ENST00000523261 ATP6V1C1P21283 382 aa11.84□□□□□ -0.51
NKX3-1-202ENST00000523261 ATP12AP54707 1039 aa11.84□□□□□ -0.51
NKX3-1-202ENST00000523261 OR2B6P58173 313 aa11.84□□□□□ -0.51
NKX3-1-202ENST00000523261 SKP2Q13309 424 aa11.84□□□□□ -0.51
NKX3-1-202ENST00000523261 ARMCX4Q5H9R4 360 aa11.84□□□□□ -0.51
NKX3-1-202ENST00000523261 ZNF362Q5T0B9 420 aaPredicted RBP11.84□□□□□ -0.51
NKX3-1-202ENST00000523261 OLFML2AQ68BL7 652 aa11.84□□□□□ -0.51
NKX3-1-202ENST00000523261 KRT80Q6KB66 452 aa11.84□□□□□ -0.51
NKX3-1-202ENST00000523261 CDC73Q6P1J9 531 aa11.84□□□□□ -0.51
NKX3-1-202ENST00000523261 C3orf62Q6ZUJ4 267 aa11.84□□□□□ -0.51
NKX3-1-202ENST00000523261 ABHD12BQ7Z5M8 362 aaPredicted RBP11.84□□□□□ -0.51
NKX3-1-202ENST00000523261 GAS2L3Q86XJ1 694 aa11.84□□□□□ -0.51
NKX3-1-202ENST00000523261 ADGRG3Q86Y34 549 aa11.84□□□□□ -0.51
NKX3-1-202ENST00000523261 ZNF614Q8N883 585 aa11.84□□□□□ -0.51
NKX3-1-202ENST00000523261 ZIC4Q8N9L1 334 aa11.84□□□□□ -0.51
NKX3-1-202ENST00000523261 DEFB108BQ8NET1 73 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms