RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 EXOSC7Q15024 291 aaKnown RBP5.8□□□□□ -1.48
SDCBP-210ENST00000522843 CHI3L2Q15782 390 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 ZSWIM7Q19AV6 140 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 AP5B1Q2VPB7 878 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 DEPDC1Q5TB30 811 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 KHDRBS2Q5VWX1 349 aaKnown RBP5.8□□□□□ -1.48
SDCBP-210ENST00000522843 RAET1LQ5VY80 246 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 CGB2Q6NT52 195 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 TFAP2EQ6VUC0 442 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 Q6YL49 198 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 NUFIP2Q7Z417 695 aaKnown RBP5.8□□□□□ -1.48
SDCBP-210ENST00000522843 PEG10Q86TG7 708 aaKnown RBP5.8□□□□□ -1.48
SDCBP-210ENST00000522843 MUC15Q8N387 334 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 OR2M3Q8NG83 312 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 MGARPQ8TDB4 240 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 HSD17B8Q92506 261 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 TMBIM1Q969X1 311 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 ESAMQ96AP7 390 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 ADGRG7Q96K78 797 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 NPAS1Q99742 590 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 PAIP2Q9BPZ3 127 aaKnown RBP5.8□□□□□ -1.48
SDCBP-210ENST00000522843 GATA5Q9BWX5 397 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-210ENST00000522843 C20orf27Q9GZN8 174 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 OR51B5Q9H339 312 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 DSN1Q9H410 356 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 EHD1Q9H4M9 534 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 ZBTB26Q9HCK0 441 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 FAIMQ9NVQ4 179 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 FBXO34Q9NWN3 711 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 MS4A12Q9NXJ0 267 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 XPR1Q9UBH6 696 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 ZNF639Q9UID6 485 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 ARL2BPQ9Y2Y0 163 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 OARD1Q9Y530 152 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 GPR45Q9Y5Y3 372 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 A0A0A6YYD5 115 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 CENPVL1A0A0U1RR11 272 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 OR6C70A6NIJ9 312 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 VSTM5A8MXK1 200 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 ZNF814B7Z6K7 855 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 EBAG9O00559 213 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 TSPAN2O60636 221 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 ADAP00813 363 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 FESP07332 822 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 FCGR2AP12318 317 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 EDNRAP25101 427 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 CTBP2P56545 445 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 HILS1P60008 231 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 OR4D1Q15615 310 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 TMEM44Q2T9K0 475 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 MST1LQ2TV78 715 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 TMEM35AQ53FP2 167 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 METTL21CQ5VZV1 264 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 FAM91A1Q658Y4 838 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 RINLQ6ZS11 566 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 Q6ZSR9 355 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 SPATA21Q7Z572 469 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 GALNT10Q86SR1 603 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 ADAMTSL2Q86TH1 951 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 ZCCHC7Q8N3Z6 543 aaKnown RBP5.79□□□□□ -1.48
SDCBP-210ENST00000522843 CCDC197Q8NCU1 140 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 SRFBP1Q8NEF9 429 aaKnown RBP5.79□□□□□ -1.48
SDCBP-210ENST00000522843 OR7G1Q8NGA0 311 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 PTCD3Q96EY7 689 aaKnown RBP5.79□□□□□ -1.48
SDCBP-210ENST00000522843 SLC35A4Q96G79 324 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 COL21A1Q96P44 957 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 SORT1Q99523 831 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 EGFL8Q99944 293 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 DHRS9Q9BPW9 319 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 ELAC2Q9BQ52 826 aaKnown RBP5.79□□□□□ -1.48
SDCBP-210ENST00000522843 HDHD5Q9BXW7 423 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 POTEKPQ9BYX7 375 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 BPESC1Q9GZL8 116 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 SERHL2Q9H4I8 314 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 METTL17Q9H7H0 456 aaPredicted RBP5.79□□□□□ -1.48
SDCBP-210ENST00000522843 SLCO1B3Q9NPD5 702 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 ESM1Q9NQ30 184 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 FGFR1OP2Q9NVK5 253 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 FLRT3Q9NZU0 649 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 MED11Q9P086 117 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 PHF11Q9UIL8 331 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 RAP2CQ9Y3L5 183 aa5.79□□□□□ -1.48
SDCBP-210ENST00000522843 WDR91A4D1P6 747 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 PABPN1LA6NDY0 278 aaKnown RBP5.78□□□□□ -1.48
SDCBP-210ENST00000522843 NCF1BA6NI72 391 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-210ENST00000522843 CCT8L1PA6NM43 557 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 A8MT66 165 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 NCF1CA8MVU1 366 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-210ENST00000522843 NDUFS8O00217 210 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 ACOX3O15254 700 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 ITM2AO43736 263 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 CXCL13O43927 109 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 SMIM24O75264 130 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 NCR1O76036 304 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 PLGP00747 810 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-210ENST00000522843 OPN1LWP04000 364 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 TROVE2P10155 538 aaKnown RBP eCLIP5.78□□□□□ -1.48
SDCBP-210ENST00000522843 NR2F6P10588 404 aa5.78□□□□□ -1.48
SDCBP-210ENST00000522843 NCF1P14598 390 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-210ENST00000522843 NT5EP21589 574 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms