RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 CAPSLQ8WWF8 208 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 TFGQ92734 400 aaPredicted RBP3.47□□□□□ -1.85
SKP1-209ENST00000522552 SARAFQ96BY9 339 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 RNF170Q96K19 258 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 SLC25A33Q9BSK2 321 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 ULBP2Q9BZM5 246 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 SRRQ9GZT4 340 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 SLC38A1Q9H2H9 487 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 KIR3DX1Q9H7L2 352 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 PLAC1Q9HBJ0 212 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 MRM3Q9HC36 420 aaKnown RBP3.47□□□□□ -1.85
SKP1-209ENST00000522552 FZD3Q9NPG1 666 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.47□□□□□ -1.851e-6■■□□□ 12.9
SKP1-209ENST00000522552 TREX1Q9NSU2 369 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 NECAP2Q9NVZ3 263 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 OARD1Q9Y530 152 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 JCADQ9P266 1359 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 A0A0A6YYH2 397 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 NKX6-3A6NJ46 265 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 A6NJ64 397 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 CENPXA8MT69 81 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 E7EWF7 191 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 NDUFAB1O14561 156 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 TOX3O15405 576 aaPredicted RBP3.46□□□□□ -1.85
SKP1-209ENST00000522552 EMC8O43402 210 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 NDUFB8O95169 186 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 JCHAINP01591 159 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 RPSAP08865 295 aaKnown RBP3.46□□□□□ -1.85
SKP1-209ENST00000522552 MAGP20916 626 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 GPD1P21695 349 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 CA6P23280 308 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 ACVR1BP36896 505 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 OPRD1P41143 372 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 CSKP41240 450 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 NBL1P41271 181 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 SLC1A1P43005 524 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 GPR1P46091 355 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 CCR8P51685 355 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 CRISP1P54107 249 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 MLF1P58340 268 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 RPS15AP62244 130 aaKnown RBP3.46□□□□□ -1.85
SKP1-209ENST00000522552 RPL24P83731 157 aaKnown RBP3.46□□□□□ -1.85
SKP1-209ENST00000522552 CDR2Q01850 454 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 PAX2Q02962 417 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 RIPPLY1Q0D2K3 151 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 RAB35Q15286 201 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 GABRA6Q16445 453 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 FAM106AQ4KMX7 169 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 PPM1LQ5SGD2 360 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 ZNF836Q6ZNA1 936 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 SLC47A2Q86VL8 602 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 FBXL14Q8N1E6 418 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 ZNF843Q8N446 348 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 KIR3DL3Q8N743 410 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 TPRX1Q8N7U7 411 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 OR5T1Q8NG75 326 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 OR2AP1Q8NGE2 309 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 LGALS14Q8TCE9 139 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 CCDC126Q96EE4 140 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 ZNF251Q9BRH9 671 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 OVOL2Q9BRP0 275 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 NHEJ1Q9H9Q4 299 aaPredicted RBP3.46□□□□□ -1.85
SKP1-209ENST00000522552 NTN4Q9HB63 628 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 BEX1Q9HBH7 125 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 SLC39A1Q9NY26 324 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 ZNF224Q9NZL3 707 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 GALPQ9UBC7 116 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 SLC17A4Q9Y2C5 497 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 USP16Q9Y5T5 823 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 PTGDR2Q9Y5Y4 395 aa3.46□□□□□ -1.85
SKP1-209ENST00000522552 PLB1Q6P1J6 1458 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 METP08581 1390 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 UBN2Q6ZU65 1347 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 LINC01553A4QN01 128 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 CLEC18AA5D8T8 446 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 ASPDHA6ND91 283 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 TCP10L2B9ZVM9 353 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 RGS14O43566 566 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 PFKFB2O60825 505 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 CD160O95971 181 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 PEX11BO96011 259 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 GCP02774 474 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 KLK1P06870 262 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 MLNP12872 115 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 ABOP16442 354 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 POLR2EP19388 210 aaKnown RBP3.46□□□□□ -1.86
SKP1-209ENST00000522552 CEACAM3P40198 252 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 CSNK1A1P48729 337 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 ELLP55199 621 aaPredicted RBP3.46□□□□□ -1.86
SKP1-209ENST00000522552 ATP6V0D1P61421 351 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 TFF2Q03403 129 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 ZNF33AQ06730 810 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 EIF2B1Q14232 305 aaKnown RBP3.46□□□□□ -1.86
SKP1-209ENST00000522552 EXOC3L4Q17RC7 722 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 RPEL1Q2QD12 228 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 TIGITQ495A1 244 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 CLVS2Q5SYC1 327 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 FAHD2BQ6P2I3 314 aaPredicted RBP3.46□□□□□ -1.86
SKP1-209ENST00000522552 PRMT9Q6P2P2 845 aa3.46□□□□□ -1.86
SKP1-209ENST00000522552 CLEC18BQ6UXF7 455 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms