RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 RIMBP3Q9UFD9 1639 aa2.59□□□□□ -1.99
HMGN1P28-201ENST00000521340 RIMS1Q86UR5 1692 aaKnown RBP2.59□□□□□ -2
HMGN1P28-201ENST00000521340 CCDC144AA2RUR9 1427 aa2.59□□□□□ -2
HMGN1P28-201ENST00000521340 PIK3C2GO75747 1445 aa2.59□□□□□ -2
HMGN1P28-201ENST00000521340 SCAPERQ9BY12 1400 aa2.59□□□□□ -2
HMGN1P28-201ENST00000521340 CDC42BPGQ6DT37 1551 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 IGKV1D-8A0A087WSZ0 117 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 VSTM2BA6NLU5 285 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 B4DXG7 233 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 H0Y8G0 127 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 GFYI3L273 518 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 FCN1O00602 326 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 CXCL13O43927 109 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 PRKYO43930 277 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 TPST2O60704 377 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 SH3BGRLO75368 114 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 CRLF1O75462 422 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 RHBDL1O75783 438 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 DUSP14O95147 198 aaKnown RBP2.58□□□□□ -2
HMGN1P28-201ENST00000521340 TBX6O95947 436 aaPredicted RBP2.58□□□□□ -2
HMGN1P28-201ENST00000521340 PGK1P00558 417 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 CRYGBP07316 175 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 H2AFZP0C0S5 128 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 CT62P0C5K7 136 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 UQCRFS1P1P0C7P4 283 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 SLC35E2P0CK97 266 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 ETS2P15036 469 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 IGLL1P15814 213 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 IMPDH1P20839 514 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 NMT1P30419 496 aaKnown RBP2.58□□□□□ -2
HMGN1P28-201ENST00000521340 DDOSTP39656 456 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 OPRD1P41143 372 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 KIR2DS2P43631 304 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 PRKXP51817 358 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 EFNA3P52797 238 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 HMGN5P82970 282 aaKnown RBP2.58□□□□□ -2
HMGN1P28-201ENST00000521340 OTUD4Q01804 1114 aaKnown RBP2.58□□□□□ -2
HMGN1P28-201ENST00000521340 FGL1Q08830 312 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 GLYR1Q49A26 553 aaPredicted RBP2.58□□□□□ -2
HMGN1P28-201ENST00000521340 KCTD21Q4G0X4 260 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 FILIP1LQ4L180 1135 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 CARD16Q5EG05 197 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 BEND3Q5T5X7 828 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 MEDAGQ5VYS4 303 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 SLC22A10Q63ZE4 541 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 SCYL2Q6P3W7 929 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 CCDC80Q76M96 950 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 TPRA1Q86W33 373 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 DHRSXQ8N5I4 330 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 OR2L3Q8NG85 312 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 OR1L4Q8NGR5 311 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 RAB3IL1Q8TBN0 382 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 SETD7Q8WTS6 366 aaKnown RBP2.58□□□□□ -2
HMGN1P28-201ENST00000521340 TRUB1Q8WWH5 349 aaKnown RBP2.58□□□□□ -2
HMGN1P28-201ENST00000521340 ST8SIA1Q92185 356 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 C10orf35Q96D05 121 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 TCEANC2Q96MN5 208 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 FOXN4Q96NZ1 517 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 OXGR1Q96P68 337 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 POPDC2Q9HBU9 364 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 SGK2Q9HBY8 427 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 TIGARQ9NQ88 270 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 PISDQ9UG56 409 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 CTNNA3Q9UI47 895 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 PIGLQ9Y2B2 252 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 MOB4Q9Y3A3 225 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 NALCNQ8IZF0 1738 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 MAP2P11137 1827 aaKnown RBP2.58□□□□□ -2
HMGN1P28-201ENST00000521340 NUP155O75694 1391 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 RPAP1Q9BWH6 1393 aaPredicted RBP2.58□□□□□ -2
HMGN1P28-201ENST00000521340 PTPRTO14522 1441 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 ERVK-7P63135 1459 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 NLRP1Q9C000 1473 aa2.58□□□□□ -2
HMGN1P28-201ENST00000521340 ADGRB1O14514 1584 aa2.57□□□□□ -2
HMGN1P28-201ENST00000521340 NRKQ7Z2Y5 1582 aa2.57□□□□□ -2
HMGN1P28-201ENST00000521340 DIP2CQ9Y2E4 1556 aa2.57□□□□□ -2
HMGN1P28-201ENST00000521340 TOPAZ1Q8N9V7 1692 aa2.57□□□□□ -2
HMGN1P28-201ENST00000521340 ARHGEF35A5YM69 484 aa2.57□□□□□ -2
HMGN1P28-201ENST00000521340 EFCAB7A8K855 629 aa2.57□□□□□ -2
HMGN1P28-201ENST00000521340 SULT2B1O00204 365 aa2.57□□□□□ -2
HMGN1P28-201ENST00000521340 HAS3O00219 553 aa2.57□□□□□ -2
HMGN1P28-201ENST00000521340 GNA14O95837 355 aa2.57□□□□□ -2
HMGN1P28-201ENST00000521340 ALOX5P09917 674 aa2.57□□□□□ -2
HMGN1P28-201ENST00000521340 MX1P20591 662 aa2.57□□□□□ -2
HMGN1P28-201ENST00000521340 SERPINA2P20848 420 aa2.57□□□□□ -2
HMGN1P28-201ENST00000521340 TDO2P48775 406 aa2.57□□□□□ -2
HMGN1P28-201ENST00000521340 IST1P53990 364 aa2.57□□□□□ -2
HMGN1P28-201ENST00000521340 CDH4P55283 916 aa2.57□□□□□ -2
HMGN1P28-201ENST00000521340 NCBP1Q09161 790 aaKnown RBP2.57□□□□□ -2
HMGN1P28-201ENST00000521340 PPIL2Q13356 520 aa2.57□□□□□ -2
HMGN1P28-201ENST00000521340 CRMP1Q14194 572 aa2.57□□□□□ -2
HMGN1P28-201ENST00000521340 SLC10A1Q14973 349 aa2.57□□□□□ -2
HMGN1P28-201ENST00000521340 ZNF77Q15935 545 aa2.57□□□□□ -2
HMGN1P28-201ENST00000521340 DPYSL2Q16555 572 aa2.57□□□□□ -2
HMGN1P28-201ENST00000521340 Q1RN00 199 aa2.57□□□□□ -2
HMGN1P28-201ENST00000521340 CTSL3PQ5NE16 218 aa2.57□□□□□ -2
HMGN1P28-201ENST00000521340 UTF1Q5T230 341 aa2.57□□□□□ -2
HMGN1P28-201ENST00000521340 OR2G6Q5TZ20 316 aa2.57□□□□□ -2
HMGN1P28-201ENST00000521340 OR2A2Q6IF42 318 aa2.57□□□□□ -2
HMGN1P28-201ENST00000521340 METAP1DQ6UB28 335 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms