RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	OR52E2	Q8NGJ4	325 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	OR1N1	Q8NGS0	311 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	DAZL	Q92904	295 aa	Known RBP	11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	ZNF524	Q96C55	264 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	ART5	Q96L15	291 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	GUCD1	Q96NT3	240 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	GPX7	Q96SL4	187 aa	Predicted RBP	11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	ADO	Q96SZ5	270 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	DDO	Q99489	341 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	NEURL2	Q9BR09	285 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	TMEM43	Q9BTV4	400 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	TMED9	Q9BVK6	235 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	HDHD5	Q9BXW7	423 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	VN1R1	Q9GZP7	353 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	CPNE5	Q9HCH3	593 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	NRIP3	Q9NQ35	241 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	KLHL21	Q9UJP4	597 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	POLH	Q9Y253	713 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	SIRT4	Q9Y6E7	314 aa	Predicted RBP	11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	VCAN	P13611	3396 aa		11.31	□□□□□ -0.6
SPIDR-210	ENST00000519362	HEATR5A	Q86XA9	2040 aa		11.31	□□□□□ -0.6
SPIDR-210	ENST00000519362	C19orf67	A6NJJ6	358 aa		11.31	□□□□□ -0.6
SPIDR-210	ENST00000519362	ARPC3	O15145	178 aa		11.31	□□□□□ -0.6
SPIDR-210	ENST00000519362	RNF13	O43567	381 aa		11.31	□□□□□ -0.6
SPIDR-210	ENST00000519362	TSPAN2	O60636	221 aa		11.31	□□□□□ -0.6
SPIDR-210	ENST00000519362	GYPB	P06028	91 aa		11.31	□□□□□ -0.6
SPIDR-210	ENST00000519362	SLC16A1	P53985	500 aa		11.31	□□□□□ -0.6
SPIDR-210	ENST00000519362	ZNF85	Q03923	595 aa		11.31	□□□□□ -0.6
SPIDR-210	ENST00000519362	POU4F2	Q12837	409 aa		11.31	□□□□□ -0.6
SPIDR-210	ENST00000519362	AGAP7P	Q5VUJ5	663 aa		11.31	□□□□□ -0.6
SPIDR-210	ENST00000519362	ZNF574	Q6ZN55	896 aa	Predicted RBP	11.31	□□□□□ -0.6
SPIDR-210	ENST00000519362	TMPRSS9	Q7Z410	1059 aa		11.31	□□□□□ -0.6
SPIDR-210	ENST00000519362	PLPP5	Q8NEB5	264 aa		11.31	□□□□□ -0.6
SPIDR-210	ENST00000519362	OR4K13	Q8NH42	304 aa		11.31	□□□□□ -0.6
SPIDR-210	ENST00000519362	SMPDL3B	Q92485	455 aa		11.31	□□□□□ -0.6
SPIDR-210	ENST00000519362	GAL3ST4	Q96RP7	486 aa		11.31	□□□□□ -0.6
SPIDR-210	ENST00000519362	TBX5	Q99593	518 aa		11.31	□□□□□ -0.6
SPIDR-210	ENST00000519362	MIXL1	Q9H2W2	232 aa		11.31	□□□□□ -0.6
SPIDR-210	ENST00000519362	TRIM36	Q9NQ86	728 aa		11.31	□□□□□ -0.6
SPIDR-210	ENST00000519362	SLC22A11	Q9NSA0	550 aa		11.31	□□□□□ -0.6
SPIDR-210	ENST00000519362	ZMIZ1	Q9ULJ6	1067 aa		11.31	□□□□□ -0.6
SPIDR-210	ENST00000519362	ADAM18	Q9Y3Q7	739 aa		11.31	□□□□□ -0.6
SPIDR-210	ENST00000519362	CMAHP	Q9Y471	501 aa		11.31	□□□□□ -0.6
SPIDR-210	ENST00000519362	IER3IP1	Q9Y5U9	82 aa		11.31	□□□□□ -0.6
SPIDR-210	ENST00000519362	LY6G6E	A0A0G2JKS1	128 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	SHISA3	A0PJX4	238 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	ELOA3D	A6NLF2	546 aa	Predicted RBP	11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	GTPBP1	O00178	669 aa	Known RBP	11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	ICOSLG	O75144	302 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	PTTG1	O95997	202 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	MT-ND5	P03915	603 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	MRPL3	P09001	348 aa	Known RBP	11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	CD53	P19397	219 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	PRPS1	P60891	318 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	ACTC1	P68032	377 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	ACTA1	P68133	377 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	EGR4	Q05215	589 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	GGTLC2	Q14390	218 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	ZNF79	Q15937	498 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	ZNF74	Q16587	644 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	ELOA3B	Q3SY89	546 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	FAAH2	Q6GMR7	532 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	DESI1	Q6ICB0	168 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	RHBDD2	Q6NTF9	364 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	COX15	Q7KZN9	410 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	GPALPP1	Q8IXQ4	340 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	PRR22	Q8IZ63	422 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	ZNF441	Q8N8Z8	693 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	FAM181A	Q8N9Y4	354 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	POC5	Q8NA72	575 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	SDR9C7	Q8NEX9	313 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	ELOA3	Q8NG57	546 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	DUSP23	Q9BVJ7	150 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	RTN4R	Q9BZR6	473 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	TGIF2	Q9GZN2	237 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	NRSN2	Q9GZP1	204 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	WWTR1	Q9GZV5	400 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	LAT2	Q9GZY6	243 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	C12orf10	Q9HB07	376 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	ABCB9	Q9NP78	766 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	CTSF	Q9UBX1	484 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	MKL2	Q9ULH7	1088 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	HIF3A	Q9Y2N7	669 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362		U3KQA8	63 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	ASXL3	Q9C0F0	2248 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	ARID1B	Q8NFD5	2236 aa	Predicted RBP	11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	IGLV3-12	A0A075B6K2	115 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362		A0A1B0GTQ1	180 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362		A0A1W2PQD3	144 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362		A0A1W2PQL4	384 aa	Predicted RBP	11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	PLPP2	O43688	288 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	ANKRD34C	P0C6C1	535 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	CAPZA2	P47755	286 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	DHPS	P49366	369 aa	Predicted RBP	11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	CCR4	P51679	360 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	INSL4	Q14641	139 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	GLYR1	Q49A26	553 aa	Predicted RBP	11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	NUP54	Q7Z3B4	507 aa		11.3	□□□□□ -0.6
SPIDR-210	ENST00000519362	MARCH9	Q86YJ5	346 aa		11.3	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms