RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 PAGE2Q7Z2X7 111 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 PIWIL3Q7Z3Z3 882 aaKnown RBP4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 VN1R4Q7Z5H5 301 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 CYP4Z1Q86W10 505 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 PAQR7Q86WK9 346 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 NUDT13Q86X67 352 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 NRROSQ86YC3 692 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 HIPK1Q86Z02 1210 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 TDHQ8IZJ6 230 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 C8orf59Q8N0T1 100 aaPredicted RBP4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 RAB42Q8N4Z0 105 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 ARL10Q8N8L6 244 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 MFSD9Q8NBP5 474 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 CSNK2A3Q8NEV1 391 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 OR2L3Q8NG85 312 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 OR4C15Q8NGM1 316 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 CCL4L1Q8NHW4 92 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 RPLP0P6Q8NHW5 317 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 PSMA8Q8TAA3 256 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 ADAMTS16Q8TE57 1224 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 APOBEC4Q8WW27 367 aaKnown RBP4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 KCNE4Q8WWG9 221 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 OR5P2Q8WZ92 322 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 DNASE1L2Q92874 299 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 MR1Q95460 341 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 EXOSC8Q96B26 276 aaKnown RBP4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 SPACA9Q96E40 222 aaPredicted RBP4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 ARSGQ96EG1 525 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 NEURL3Q96EH8 262 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 BMFQ96LC9 184 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 MUS81Q96NY9 551 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 PITX2Q99697 317 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 RSPO3Q9BXY4 272 aaPredicted RBP4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 PPIL3Q9H2H8 161 aaKnown RBP4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 RAD21L1Q9H4I0 556 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 C8orf33Q9H7E9 229 aaPredicted RBP4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 DDX31Q9H8H2 851 aaKnown RBP4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 SEBOXQ9HB31 216 aaPredicted RBP4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 MRPS30Q9NP92 439 aaKnown RBP4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 A4GALTQ9NPC4 353 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 TRPV5Q9NQA5 729 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 EXD2Q9NVH0 621 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 FAM118AQ9NWS6 357 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 THUMPD1Q9NXG2 353 aaKnown RBP4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 TAS2R9Q9NYW1 312 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 PTTG2Q9NZH5 202 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 COQ3Q9NZJ6 369 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 NDUFA13Q9P0J0 144 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 ZNF624Q9P2J8 865 aaPredicted RBP4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 THEGQ9P2T0 379 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 SPASTQ9UBP0 616 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 APOBEC3BQ9UH17 382 aaKnown RBP4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 MMP17Q9ULZ9 603 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 SCML1Q9UN30 329 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 CDC14AQ9UNH5 594 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 FAF1Q9UNN5 650 aaPredicted RBP4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 PADI2Q9Y2J8 665 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 KLHL20Q9Y2M5 609 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 PAM16Q9Y3D7 125 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 NAALAD2Q9Y3Q0 740 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 SAMHD1Q9Y3Z3 626 aaKnown RBP4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 HS3ST3A1Q9Y663 406 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 AP1M2Q9Y6Q5 423 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 U3KQV3 271 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 DOCK9Q9BZ29 2069 aa4.4□□□□□ -1.71
CTNNA1-212ENST00000518919 A0A0B4J293 547 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 LRIT2A6NDA9 550 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 OR6C76A6NM76 312 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 WASHC1A8K0Z3 465 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 H3BSA7 217 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 SLC1A7O00341 560 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 BTN3A3O00478 584 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 GNGT2O14610 69 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 P2RX6O15547 441 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 ERI3O43414 337 aaKnown RBP4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 PLPP2O43688 288 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 KRT75O95678 551 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 APBB3O95704 486 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 AIFM1O95831 613 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 IFNA2P01563 188 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 IGLV3-19P01714 112 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 C9P02748 559 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 IGHV4-34P06331 123 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 ACHEP22303 614 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 HNRNPA2B1P22626 353 aaKnown RBP4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 CRHBPP24387 322 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 ATP5A1P25705 553 aaKnown RBP4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 EPHA2P29317 976 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 RRM2P31350 389 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 AHRP35869 848 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 CHI3L1P36222 383 aaPredicted RBP4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 ACTR1BP42025 376 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 SSR2P43308 183 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 XCR1P46094 333 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 PLA2G16P53816 162 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 SELENOVP59797 346 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 GABARAPL2P60520 117 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 DSTNP60981 165 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 ACTR1AP61163 376 aa4.39□□□□□ -1.71
CTNNA1-212ENST00000518919 TRA2BP62995 288 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms