RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 KCNJ2P63252 427 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 MRPS11P82912 194 aaKnown RBP2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 FCHO2Q0JRZ9 810 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 WDR43Q15061 677 aaKnown RBP eCLIP2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 OR2G6Q5TZ20 316 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 AGBL2Q5U5Z8 902 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 SLC22A10Q63ZE4 541 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 HSDL2Q6YN16 418 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 ASCL5Q7RTU5 278 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 C9orf40Q8IXQ3 194 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 ABHD12Q8N2K0 398 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 OR4F6Q8NGB9 312 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 OR56B4Q8NH76 319 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 TSEN15Q8WW01 171 aaKnown RBP2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 TCTEX1D2Q8WW35 142 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 MRPS31Q92665 395 aaKnown RBP2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 NRGNQ92686 78 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 KIFAP3Q92845 792 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 UFD1Q92890 307 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 SLC38A4Q969I6 547 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 KIAA1143Q96AT1 154 aaPredicted RBP2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 ISG20Q96AZ6 181 aaKnown RBP2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 POM121L2Q96KW2 1035 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 DUX3Q96PT4 197 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 OPRPNQ99935 248 aaPredicted RBP2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 LRRC61Q9BV99 259 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 BARHL1Q9BZE3 327 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 CHIAQ9BZP6 476 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 IQCGQ9H095 443 aaKnown RBP2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 ZNF385DQ9H6B1 395 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 REEP4Q9H6H4 257 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 SMYD3Q9H7B4 428 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 HEXA-AS1Q9H8Q6 139 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 MIEF1Q9NQG6 463 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 NUDT15Q9NV35 164 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 IMPAD1Q9NX62 359 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 THUMPD1Q9NXG2 353 aaKnown RBP2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 SPRR3Q9UBC9 169 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 TBC1D24Q9ULP9 559 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 COPS3Q9UNS2 423 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 KCNIP3Q9Y2W7 256 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 STYXL1Q9Y6J8 313 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 CLSPNQ9HAW4 1339 aa2.58□□□□□ -2
SCARNA15.2-201ENST00000516409 IGHV3OR16-10A0A075B7F0 116 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 TUBAL3A6NHL2 446 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 B4DXG7 233 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 PRSS44E7EML9 344 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 GOLGA8TH3BQL2 631 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 CLOCKO15516 846 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 HCN1O60741 890 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 C1orf105O95561 183 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 HOXD4P09016 255 aaPredicted RBP2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 H2AFZP0C0S5 128 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 SLC35E2P0CK97 266 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 ZNF43P17038 809 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 NPR2P20594 1047 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 HOXD10P28358 340 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 ADORA2BP29275 332 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 RPL29P47914 159 aaKnown RBP2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 GSSP48637 474 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 SLC11A1P49279 550 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 EFNA3P52797 238 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 IST1P53990 364 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 ATP12AP54707 1039 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 BIDP55957 195 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 CLDN8P56748 225 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 SPAG1Q07617 926 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 SCRN3Q0VDG4 424 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 OXA1LQ15070 435 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 HIKESHIQ53FT3 197 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 GPRC6AQ5T6X5 926 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 OR52E8Q6IFG1 317 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 SASS6Q6UVJ0 657 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 LRRC74BQ6ZQY2 392 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 TMUB2Q71RG4 321 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 Q8N377 158 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 FBXL16Q8N461 479 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 PDCL2Q8N4E4 241 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 TPRX1Q8N7U7 411 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 C9orf106Q8NAJ2 232 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 B3GNT7Q8NFL0 401 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 OR7G2Q8NG99 324 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 OR4C5Q8NGB2 326 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 ZPLD1Q8TCW7 415 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 ACMSDQ8TDX5 336 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 ANKRD49Q8WVL7 239 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 HTR3CQ8WXA8 447 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 FGF11Q92914 225 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 ZNF707Q96C28 371 aaPredicted RBP2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 ZBED6CLQ96FA7 236 aaPredicted RBP2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 OXGR1Q96P68 337 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 TGS1Q96RS0 853 aaKnown RBP2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 TEKT3Q9BXF9 490 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 ELOVL4Q9GZR5 314 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 ILKAPQ9H0C8 392 aaPredicted RBP2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 CLSTN2Q9H4D0 955 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 CYP3A43Q9HB55 503 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 AHSPQ9NZD4 102 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 STAP1Q9ULZ2 295 aa2.57□□□□□ -2
SCARNA15.2-201ENST00000516409 TMCO1Q9UM00 188 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms