RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 GSTA4O15217 222 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 IFNA14P01570 189 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 KLK2P20151 261 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 MAP2K6P52564 334 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 OR2B6P58173 313 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 NCALDP61601 193 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 CSNK2A1P68400 391 aaPredicted RBP12.47□□□□□ -0.41
USP46-209ENST00000514536 SLC25A3Q00325 362 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 KRT72Q14CN4 511 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 OR1Q1Q15612 314 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 NRF1Q16656 503 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 LRRC23Q53EV4 343 aaPredicted RBP12.47□□□□□ -0.41
USP46-209ENST00000514536 ZNF787Q6DD87 383 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 VWA1Q6PCB0 445 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 FCRLAQ7L513 359 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 BTLAQ7Z6A9 289 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 ATG4DQ86TL0 474 aaPredicted RBP12.47□□□□□ -0.41
USP46-209ENST00000514536 RANBP3LQ86VV4 465 aaPredicted RBP12.47□□□□□ -0.41
USP46-209ENST00000514536 LURAP1LQ8IV03 231 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 LSMEM1Q8N8F7 131 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 OR4D11Q8NGI4 311 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 VANGL1Q8TAA9 524 aaPredicted RBP12.47□□□□□ -0.41
USP46-209ENST00000514536 RNF217Q8TC41 542 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 ABHD3Q8WU67 409 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 RASSF5Q8WWW0 418 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 GMPPAQ96IJ6 420 aaPredicted RBP12.47□□□□□ -0.41
USP46-209ENST00000514536 NSL1Q96IY1 281 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 MCHR1Q99705 422 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 ALG2Q9H553 416 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 NPDC1Q9NQX5 325 aaPredicted RBP12.47□□□□□ -0.41
USP46-209ENST00000514536 ABCD2Q9UBJ2 740 aa12.47□□□□□ -0.41
USP46-209ENST00000514536 TESQ9UGI8 421 aaKnown RBP12.47□□□□□ -0.41
USP46-209ENST00000514536 ELOA3DA6NLF2 546 aaPredicted RBP12.46□□□□□ -0.42
USP46-209ENST00000514536 A8MVM7 634 aa12.46□□□□□ -0.42
USP46-209ENST00000514536 PRKD3O94806 890 aa12.46□□□□□ -0.42
USP46-209ENST00000514536 PMS2P2O95744 297 aa12.46□□□□□ -0.42
USP46-209ENST00000514536 IMPDH2P12268 514 aa12.46□□□□□ -0.42
USP46-209ENST00000514536 ASCL1P50553 236 aa12.46□□□□□ -0.42
USP46-209ENST00000514536 CTBP2P56545 445 aa12.46□□□□□ -0.42
USP46-209ENST00000514536 MXRA7P84157 204 aa12.46□□□□□ -0.42
USP46-209ENST00000514536 GUSBP1Q15486 140 aa12.46□□□□□ -0.42
USP46-209ENST00000514536 ELOA3BQ3SY89 546 aa12.46□□□□□ -0.42
USP46-209ENST00000514536 CYBRD1Q53TN4 286 aa12.46□□□□□ -0.42
USP46-209ENST00000514536 FAM214BQ7L5A3 538 aa12.46□□□□□ -0.42
USP46-209ENST00000514536 LUZP2Q86TE4 346 aa12.46□□□□□ -0.42
USP46-209ENST00000514536 RBM45Q8IUH3 476 aaKnown RBP12.46□□□□□ -0.42
USP46-209ENST00000514536 ELOA3Q8NG57 546 aa12.46□□□□□ -0.42
USP46-209ENST00000514536 OR6T1Q8NGN1 323 aa12.46□□□□□ -0.42
USP46-209ENST00000514536 RNF128Q8TEB7 428 aa12.46□□□□□ -0.42
USP46-209ENST00000514536 DNAJA4Q8WW22 397 aaPredicted RBP12.46□□□□□ -0.42
USP46-209ENST00000514536 PROX1Q92786 737 aa12.46□□□□□ -0.42
USP46-209ENST00000514536 KCTD14Q9BQ13 255 aaPredicted RBP12.46□□□□□ -0.42
USP46-209ENST00000514536 POTEKPQ9BYX7 375 aa12.46□□□□□ -0.42
USP46-209ENST00000514536 PIGMQ9H3S5 423 aa12.46□□□□□ -0.42
USP46-209ENST00000514536 SPAG4Q9NPE6 437 aa12.46□□□□□ -0.42
USP46-209ENST00000514536 GLRX2Q9NS18 164 aa12.46□□□□□ -0.42
USP46-209ENST00000514536 JKAMPQ9P055 326 aa12.46□□□□□ -0.42
USP46-209ENST00000514536 TMEM181Q9P2C4 612 aa12.46□□□□□ -0.42
USP46-209ENST00000514536 PACSIN3Q9UKS6 424 aa12.46□□□□□ -0.42
USP46-209ENST00000514536 TRAPPC4Q9Y296 219 aa12.46□□□□□ -0.42
USP46-209ENST00000514536 SH3GLB1Q9Y371 365 aa12.46□□□□□ -0.42
USP46-209ENST00000514536 DOCK7Q96N67 2140 aa12.45□□□□□ -0.42
USP46-209ENST00000514536 UNC79Q9P2D8 2635 aa12.45□□□□□ -0.42
USP46-209ENST00000514536 TMEM229AB2RXF0 380 aa12.45□□□□□ -0.42
USP46-209ENST00000514536 CXCR6O00574 342 aa12.45□□□□□ -0.42
USP46-209ENST00000514536 SMAD9O15198 467 aaKnown RBP12.45□□□□□ -0.42
USP46-209ENST00000514536 SMNDC1O75940 238 aaKnown RBP eCLIP12.45□□□□□ -0.42
USP46-209ENST00000514536 FPR1P21462 350 aa12.45□□□□□ -0.42
USP46-209ENST00000514536 UQCRC1P31930 480 aa12.45□□□□□ -0.42
USP46-209ENST00000514536 RNPS1Q15287 305 aaKnown RBP12.45□□□□□ -0.42
USP46-209ENST00000514536 NPTX1Q15818 432 aa12.45□□□□□ -0.42
USP46-209ENST00000514536 ALG10BQ5I7T1 473 aa12.45□□□□□ -0.42
USP46-209ENST00000514536 ULK3Q6PHR2 472 aa12.45□□□□□ -0.42
USP46-209ENST00000514536 TUSC5Q8IXB3 177 aa12.45□□□□□ -0.42
USP46-209ENST00000514536 SLC43A2Q8N370 569 aa12.45□□□□□ -0.42
USP46-209ENST00000514536 RNF148Q8N7C7 305 aa12.45□□□□□ -0.42
USP46-209ENST00000514536 RNASE6Q93091 150 aaKnown RBP12.45□□□□□ -0.42
USP46-209ENST00000514536 ZHX1-C8orf76Q96EF9 292 aa12.45□□□□□ -0.42
USP46-209ENST00000514536 SELENONQ9NZV5 590 aa12.45□□□□□ -0.42
USP46-209ENST00000514536 BAG5Q9UL15 447 aa12.45□□□□□ -0.42
USP46-209ENST00000514536 SLC9A8Q9Y2E8 581 aa12.45□□□□□ -0.42
USP46-209ENST00000514536 EMC9Q9Y3B6 208 aa12.45□□□□□ -0.42
USP46-209ENST00000514536 NOTCH2Q04721 2471 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 MED12LQ86YW9 2145 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 CPSF4LA6NMK7 179 aaKnown RBP12.44□□□□□ -0.42
USP46-209ENST00000514536 B2RBV5 119 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 SS18L1O75177 396 aaPredicted RBP12.44□□□□□ -0.42
USP46-209ENST00000514536 CGAP01215 116 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 COX6B1P14854 86 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 NCK1P16333 377 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 TNFRSF1BP20333 461 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 IDUAP35475 653 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 MNAT1P51948 309 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 SLC35A1P78382 337 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 RASGEF1BQ0VAM2 473 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 SNTB1Q13884 538 aaKnown RBP12.44□□□□□ -0.42
USP46-209ENST00000514536 CEACAM7Q14002 265 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 FBXL19-AS1Q494R0 122 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 ENTPD8Q5MY95 495 aa12.44□□□□□ -0.42
USP46-209ENST00000514536 C1orf140Q5VVS0 124 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms