RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 SLC22A31A6NKX4 558 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 CCRL2O00421 344 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 KPNA4O00629 521 aaPredicted RBP7.63□□□□□ -1.19
RNF4-220ENST00000513578 FZD7O75084 574 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 CSO75390 466 aaKnown RBP7.63□□□□□ -1.19
RNF4-220ENST00000513578 KLF7O75840 302 aaPredicted RBP7.63□□□□□ -1.19
RNF4-220ENST00000513578 IFNGP01579 166 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 UMODP07911 640 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 FBXO45P0C2W1 286 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 ASAH2BP0C7U1 165 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 CDK4P11802 303 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 GP1BBP13224 206 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 MYL12AP19105 171 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 SLC2A5P22732 501 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 CAPZA2P47755 286 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 MAP2K6P52564 334 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 EGR4Q05215 589 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 EIF3IQ13347 325 aaKnown RBP7.63□□□□□ -1.19
RNF4-220ENST00000513578 C1DQ13901 141 aaKnown RBP7.63□□□□□ -1.19
RNF4-220ENST00000513578 SPHARQ15513 63 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 ZNF74Q16587 644 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 FAAH2Q6GMR7 532 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 NIPAL3Q6P499 406 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 GRINAQ7Z429 371 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 BCDIN3DQ7Z5W3 292 aaKnown RBP7.63□□□□□ -1.19
RNF4-220ENST00000513578 MARCH3Q86UD3 253 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 CPOQ8IVL8 374 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 NAXDQ8IW45 347 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 DND1Q8IYX4 353 aaKnown RBP7.63□□□□□ -1.19
RNF4-220ENST00000513578 LRRC75AQ8NAA5 344 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 ZNF485Q8NCK3 441 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 B4GALNT2Q8NHY0 566 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 RNF217Q8TC41 542 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 SLC22A8Q8TCC7 542 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 STK35Q8TDR2 534 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 GPR119Q8TDV5 335 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 TMEM234Q8WY98 164 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 ST8SIA1Q92185 356 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 ATOH1Q92858 354 aaPredicted RBP7.63□□□□□ -1.19
RNF4-220ENST00000513578 MR1Q95460 341 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 NTNG2Q96CW9 530 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 OR5M11Q96RB7 305 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 TAAR9Q96RI9 348 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 SECISBP2Q96T21 854 aaKnown RBP7.63□□□□□ -1.19
RNF4-220ENST00000513578 DDOQ99489 341 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 IFT27Q9BW83 186 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 RTN4RQ9BZR6 473 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 NDEL1Q9GZM8 345 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 MMP25Q9NPA2 562 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 NRIP3Q9NQ35 241 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 INPP5EQ9NRR6 644 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 CHCHD3Q9NX63 227 aaKnown RBP7.63□□□□□ -1.19
RNF4-220ENST00000513578 MYOTQ9UBF9 498 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 ZNF229Q9UJW7 825 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 B3GALT1Q9Y5Z6 326 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 A3GALT2U3KPV4 340 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 PTPRZ1P23471 2315 aaPredicted RBP7.62□□□□□ -1.19
RNF4-220ENST00000513578 TRAV27A0A087WT01 109 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 ANKUB1A6NFN9 424 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 RIIAD1A6NNX1 92 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 PRR23D1E9PI22 279 aaPredicted RBP7.62□□□□□ -1.19
RNF4-220ENST00000513578 PLD2O14939 933 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 MYL12BO14950 172 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 HCRTR2O43614 444 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 AIREO43918 545 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 ZNF354AO60765 605 aaPredicted RBP7.62□□□□□ -1.19
RNF4-220ENST00000513578 LRP3O75074 770 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 NPIPB7O75200 414 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 SLC2A10O95528 541 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 TXNDC12O95881 172 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 DLGAP3O95886 979 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 CH25HO95992 272 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 MT-ATP6P00846 226 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 LIMS3P0CW19 117 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 LIMS4P0CW20 117 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 PRR23D2P0DMB1 279 aaPredicted RBP7.62□□□□□ -1.19
RNF4-220ENST00000513578 GAAP10253 952 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 COX6A1P12074 109 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 CPEP16870 476 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 ZNF182P17025 639 aaPredicted RBP7.62□□□□□ -1.19
RNF4-220ENST00000513578 ZNF3P17036 446 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 PAICSP22234 425 aaKnown RBP7.62□□□□□ -1.19
RNF4-220ENST00000513578 TACR3P29371 465 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 UQCRC1P31930 480 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 PEX19P40855 299 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 POLR2HP52434 150 aaKnown RBP7.62□□□□□ -1.19
RNF4-220ENST00000513578 WNT4P56705 351 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 INSM1Q01101 510 aaPredicted RBP7.62□□□□□ -1.19
RNF4-220ENST00000513578 POU4F2Q12837 409 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 ITGADQ13349 1161 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 TPBGQ13641 420 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 IL10RAQ13651 578 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 GGTLC2Q14390 218 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 SPCS2Q15005 226 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 MED22Q15528 200 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 NTRK2Q16620 822 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 MOGQ16653 247 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 SLC25A53Q5H9E4 307 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 EMC4Q5J8M3 183 aa7.62□□□□□ -1.19
RNF4-220ENST00000513578 SLC35D3Q5M8T2 416 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms