RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 CMTM3Q96MX0 182 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 PHOX2BQ99453 314 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 NMNAT2Q9BZQ4 307 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 HAPLN2Q9GZV7 340 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 P2RY12Q9H244 342 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 SLC6A20Q9NP91 592 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 SLC39A9Q9NUM3 307 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 HHLA2Q9UM44 414 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 GPR52Q9Y2T5 361 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 HCFC2Q9Y5Z7 792 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 TMEM269A0A1B0GVZ9 245 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 FIGNL2A6NMB9 653 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 GOSR2O14653 212 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 TYROBPO43914 113 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 PRKACBP22694 351 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 IL4RP24394 825 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 RPS5P46782 204 aaKnown RBP5.4□□□□□ -1.54
USP38-203ENST00000511739 EMP3P54852 163 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 TBRG1Q3YBR2 411 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 TP53I3Q53FA7 332 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 FAM182AQ5T1J6 154 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 HBMQ6B0K9 141 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 WBP2NLQ6ICG8 309 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 EPGNQ6UW88 154 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 IL34Q6ZMJ4 242 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 SYT13Q7L8C5 426 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 FAM217AQ8IXS0 508 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 TMEM239Q8WW34 195 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 MYLIPQ8WY64 445 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 FOXRED1Q96CU9 486 aaPredicted RBP5.4□□□□□ -1.54
USP38-203ENST00000511739 RBMXL1Q96E39 390 aaKnown RBP5.4□□□□□ -1.54
USP38-203ENST00000511739 MRGPRX2Q96LB1 330 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 ZNF583Q96ND8 569 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 PGAP2Q9UHJ9 254 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 PLEKHM1Q9Y4G2 1056 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 ATG4BQ9Y4P1 393 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 MYADML2A6NDP7 307 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 ZNF736B4DX44 427 aaPredicted RBP5.4□□□□□ -1.54
USP38-203ENST00000511739 AIPO00170 330 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 SGCEO43556 437 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 GRPP07492 148 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 ZNF182P17025 639 aaPredicted RBP5.4□□□□□ -1.54
USP38-203ENST00000511739 CSN1S1P47710 185 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 ZNF791Q3KP31 576 aaPredicted RBP5.4□□□□□ -1.54
USP38-203ENST00000511739 ZNF468Q5VIY5 522 aaPredicted RBP5.4□□□□□ -1.54
USP38-203ENST00000511739 DPY19L2P1Q6NXN4 242 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 ZFP82Q8N141 532 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 SLC39A11Q8N1S5 342 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 ACOT4Q8N9L9 421 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 TMEM185AQ8NFB2 350 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 NSUN5Q96P11 429 aaKnown RBP5.4□□□□□ -1.54
USP38-203ENST00000511739 PEBP4Q96S96 227 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 ANKRD19PQ9H560 264 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 ACOT13Q9NPJ3 140 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 TMEM9BQ9NQ34 198 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 RIMS3Q9UJD0 308 aa5.4□□□□□ -1.54
USP38-203ENST00000511739 ECM29Q5VYK3 1845 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 H3BNC9 293 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 TXNL1O43396 289 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 PRAMEF4O60810 478 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 VEGFCP49767 419 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 MTCP1P56278 107 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 EXOSC7Q15024 291 aaKnown RBP5.4□□□□□ -1.55
USP38-203ENST00000511739 KCNJ8Q15842 424 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 CLVS2Q5SYC1 327 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 VASNQ6EMK4 673 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 PAPD4Q6PIY7 484 aaKnown RBP5.4□□□□□ -1.55
USP38-203ENST00000511739 ZNF813Q6ZN06 617 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 SKA3Q8IX90 412 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 ACBD4Q8NC06 268 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 OR6T1Q8NGN1 323 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 PKP2Q99959 881 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 CACNG6Q9BXT2 260 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 FGF21Q9NSA1 209 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 C14orf119Q9NWQ9 140 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 CXXC1Q9P0U4 656 aaPredicted RBP5.4□□□□□ -1.55
USP38-203ENST00000511739 CLEC1BQ9P126 229 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 PHIPQ8WWQ0 1821 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 PMS2P1A4D2B8 440 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 MAOAP21397 527 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 SUB1P53999 127 aaKnown RBP eCLIP5.4□□□□□ -1.55
USP38-203ENST00000511739 CLDN8P56748 225 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 LTB4RQ15722 352 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 SFT2D3Q587I9 215 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 GAREM2Q75VX8 874 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 NLRC3Q7RTR2 1065 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 CHCHD4Q8N4Q1 142 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 MITD1Q8WV92 249 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 ACOT11Q8WXI4 607 aaPredicted RBP5.4□□□□□ -1.55
USP38-203ENST00000511739 ZNF419Q96HQ0 510 aaPredicted RBP5.4□□□□□ -1.55
USP38-203ENST00000511739 FBXL20Q96IG2 436 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 MGLLQ99685 303 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 ANKRD10Q9NXR5 420 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 PDE4DIPQ5VU43 2346 aa5.4□□□□□ -1.55
USP38-203ENST00000511739 TAF1LQ8IZX4 1826 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 A0A1W2PS29 197 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 PRAMEF27A3QJZ7 478 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 FAM166BA8MTA8 275 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 KCNK2O95069 426 aa5.39□□□□□ -1.55
USP38-203ENST00000511739 APOC3P02656 99 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms