RNA–Protein interactions for RNA: ENST00000509962.5

SMAD5-206, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-206ENST00000509962 BPGMP07738 259 aa13.03□□□□□ -0.32
SMAD5-206ENST00000509962 NUDT17P0C025 328 aa13.03□□□□□ -0.32
SMAD5-206ENST00000509962 APOBEC3AP31941 199 aaPredicted RBP13.03□□□□□ -0.32
SMAD5-206ENST00000509962 SLC35A1P78382 337 aa13.03□□□□□ -0.32
SMAD5-206ENST00000509962 VLDLRP98155 873 aa13.03□□□□□ -0.32
SMAD5-206ENST00000509962 TGFBR3Q03167 851 aa13.03□□□□□ -0.32
SMAD5-206ENST00000509962 IFFO1Q0D2I5 559 aa13.03□□□□□ -0.32
SMAD5-206ENST00000509962 C9orf135Q5VTT2 229 aa13.03□□□□□ -0.32
SMAD5-206ENST00000509962 AP1ARQ63HQ0 302 aa13.03□□□□□ -0.32
SMAD5-206ENST00000509962 TNFAIP8L2Q6P589 184 aaPredicted RBP13.03□□□□□ -0.32
SMAD5-206ENST00000509962 ANKRD46Q86W74 232 aa13.03□□□□□ -0.32
SMAD5-206ENST00000509962 NUDCD3Q8IVD9 361 aa13.03□□□□□ -0.32
SMAD5-206ENST00000509962 ZNF525Q8N782 197 aa13.03□□□□□ -0.32
SMAD5-206ENST00000509962 FAM71CQ8NEG0 241 aa13.03□□□□□ -0.32
SMAD5-206ENST00000509962 OR52E4Q8NGH9 312 aa13.03□□□□□ -0.32
SMAD5-206ENST00000509962 PROX1Q92786 737 aa13.03□□□□□ -0.32
SMAD5-206ENST00000509962 PMM1Q92871 262 aa13.03□□□□□ -0.32
SMAD5-206ENST00000509962 DDIT4LQ96D03 193 aa13.03□□□□□ -0.32
SMAD5-206ENST00000509962 PPP1R36Q96LQ0 422 aa13.03□□□□□ -0.32
SMAD5-206ENST00000509962 ZIM3Q96PE6 472 aa13.03□□□□□ -0.32
SMAD5-206ENST00000509962 SAP130Q9H0E3 1048 aa13.03□□□□□ -0.32
SMAD5-206ENST00000509962 MANSC1Q9H8J5 431 aa13.03□□□□□ -0.32
SMAD5-206ENST00000509962 TMEM160Q9NX00 188 aa13.03□□□□□ -0.32
SMAD5-206ENST00000509962 ASIC5Q9NY37 505 aa13.03□□□□□ -0.32
SMAD5-206ENST00000509962 YLPM1P49750 1951 aaKnown RBP13.02□□□□□ -0.32
SMAD5-206ENST00000509962 A0A096LNT2 108 aa13.02□□□□□ -0.33
SMAD5-206ENST00000509962 TMED7-TICAM2A0A0A6YYA0 188 aa13.02□□□□□ -0.33
SMAD5-206ENST00000509962 BCAS1O75363 584 aaPredicted RBP13.02□□□□□ -0.33
SMAD5-206ENST00000509962 ITGA5P08648 1049 aa13.02□□□□□ -0.33
SMAD5-206ENST00000509962 CHI3L1P36222 383 aaPredicted RBP13.02□□□□□ -0.33
SMAD5-206ENST00000509962 EFNA4P52798 201 aa13.02□□□□□ -0.33
SMAD5-206ENST00000509962 FOXG1P55316 489 aaPredicted RBP13.02□□□□□ -0.33
SMAD5-206ENST00000509962 HPCAP84074 193 aa13.02□□□□□ -0.33
SMAD5-206ENST00000509962 H3F3AP84243 136 aa13.02□□□□□ -0.33
SMAD5-206ENST00000509962 EMBQ6PCB8 327 aa13.02□□□□□ -0.33
SMAD5-206ENST00000509962 CASP12Q6UXS9 341 aa13.02□□□□□ -0.33
SMAD5-206ENST00000509962 B3GLCTQ6Y288 498 aa13.02□□□□□ -0.33
SMAD5-206ENST00000509962 FRRS1Q6ZNA5 592 aa13.02□□□□□ -0.33
SMAD5-206ENST00000509962 WDR31Q8NA23 367 aa13.02□□□□□ -0.33
SMAD5-206ENST00000509962 NANOS1Q8WY41 292 aaKnown RBP13.02□□□□□ -0.33
SMAD5-206ENST00000509962 ROPN1BQ9BZX4 212 aaPredicted RBP13.02□□□□□ -0.33
SMAD5-206ENST00000509962 SHARPINQ9H0F6 387 aa13.02□□□□□ -0.33
SMAD5-206ENST00000509962 AKTIPQ9H8T0 292 aa13.02□□□□□ -0.33
SMAD5-206ENST00000509962 ROPN1Q9HAT0 212 aaPredicted RBP13.02□□□□□ -0.33
SMAD5-206ENST00000509962 EXOSC3Q9NQT5 275 aaKnown RBP13.02□□□□□ -0.33
SMAD5-206ENST00000509962 LPAR3Q9UBY5 353 aa13.02□□□□□ -0.33
SMAD5-206ENST00000509962 DCTN4Q9UJW0 460 aa13.02□□□□□ -0.33
SMAD5-206ENST00000509962 SLC9A8Q9Y2E8 581 aa13.02□□□□□ -0.33
SMAD5-206ENST00000509962 AMDHD2Q9Y303 409 aa13.02□□□□□ -0.33
SMAD5-206ENST00000509962 TMED7Q9Y3B3 224 aa13.02□□□□□ -0.33
SMAD5-206ENST00000509962 ZNF208O43345 1280 aa13.01□□□□□ -0.33
SMAD5-206ENST00000509962 SCN2BO60939 215 aa13.01□□□□□ -0.33
SMAD5-206ENST00000509962 WNT11O96014 354 aa13.01□□□□□ -0.33
SMAD5-206ENST00000509962 F12P00748 615 aaPredicted RBP13.01□□□□□ -0.33
SMAD5-206ENST00000509962 CSF3P09919 207 aa13.01□□□□□ -0.33
SMAD5-206ENST00000509962 USF1P22415 310 aaPredicted RBP13.01□□□□□ -0.33
SMAD5-206ENST00000509962 KHKP50053 298 aa13.01□□□□□ -0.33
SMAD5-206ENST00000509962 POLR2HP52434 150 aaKnown RBP13.01□□□□□ -0.33
SMAD5-206ENST00000509962 PRPS1P60891 318 aa13.01□□□□□ -0.33
SMAD5-206ENST00000509962 PDCD2Q16342 344 aaPredicted RBP13.01□□□□□ -0.33
SMAD5-206ENST00000509962 C1QTNF12Q5T7M4 302 aa13.01□□□□□ -0.33
SMAD5-206ENST00000509962 SAXO2Q658L1 398 aa13.01□□□□□ -0.33
SMAD5-206ENST00000509962 HMGN2P46Q86SG4 172 aa13.01□□□□□ -0.33
SMAD5-206ENST00000509962 C17orf78Q8N4C9 275 aa13.01□□□□□ -0.33
SMAD5-206ENST00000509962 C10orf105Q8TEF2 133 aa13.01□□□□□ -0.33
SMAD5-206ENST00000509962 SLC17A5Q9NRA2 495 aa13.01□□□□□ -0.33
SMAD5-206ENST00000509962 SLC7A10Q9NS82 523 aa13.01□□□□□ -0.33
SMAD5-206ENST00000509962 MARCOQ9UEW3 520 aaPredicted RBP13.01□□□□□ -0.33
SMAD5-206ENST00000509962 LGALS13Q9UHV8 139 aa13.01□□□□□ -0.33
SMAD5-206ENST00000509962 FLVCR1Q9Y5Y0 555 aa13.01□□□□□ -0.33
SMAD5-206ENST00000509962 PLCE1Q9P212 2302 aa13□□□□□ -0.33
SMAD5-206ENST00000509962 CLDN24A6NM45 220 aa13□□□□□ -0.33
SMAD5-206ENST00000509962 PDLIM1O00151 329 aa13□□□□□ -0.33
SMAD5-206ENST00000509962 MYZAPP0CAP1 466 aa13□□□□□ -0.33
SMAD5-206ENST00000509962 TACR3P29371 465 aa13□□□□□ -0.33
SMAD5-206ENST00000509962 MAP2K6P52564 334 aa13□□□□□ -0.33
SMAD5-206ENST00000509962 PHC1P78364 1004 aa13□□□□□ -0.33
SMAD5-206ENST00000509962 LSM11P83369 360 aaKnown RBP eCLIP13□□□□□ -0.332e-6■■■□□ 15.4
SMAD5-206ENST00000509962 GNA13Q14344 377 aa13□□□□□ -0.33
SMAD5-206ENST00000509962 TSPO2Q5TGU0 170 aa13□□□□□ -0.33
SMAD5-206ENST00000509962 CMIPQ8IY22 773 aa13□□□□□ -0.33
SMAD5-206ENST00000509962 C1orf162Q8NEQ5 155 aaPredicted RBP13□□□□□ -0.33
SMAD5-206ENST00000509962 CNOT9Q92600 299 aaKnown RBP13□□□□□ -0.33
SMAD5-206ENST00000509962 NEURL3Q96EH8 262 aa13□□□□□ -0.33
SMAD5-206ENST00000509962 SLC35A5Q9BS91 424 aa13□□□□□ -0.33
SMAD5-206ENST00000509962 AMBRA1Q9C0C7 1298 aa13□□□□□ -0.33
SMAD5-206ENST00000509962 MTHFD2LQ9H903 347 aaPredicted RBP13□□□□□ -0.33
SMAD5-206ENST00000509962 OSGIN1Q9UJX0 560 aa13□□□□□ -0.33
SMAD5-206ENST00000509962 TMEM72A0PK05 275 aa12.99□□□□□ -0.33
SMAD5-206ENST00000509962 WDR91A4D1P6 747 aa12.99□□□□□ -0.33
SMAD5-206ENST00000509962 HMGN4O00479 90 aa12.99□□□□□ -0.33
SMAD5-206ENST00000509962 AP3D1O14617 1153 aa12.99□□□□□ -0.33
SMAD5-206ENST00000509962 ITM2AO43736 263 aa12.99□□□□□ -0.33
SMAD5-206ENST00000509962 LMX1BO60663 402 aa12.99□□□□□ -0.33
SMAD5-206ENST00000509962 IMPDH2P12268 514 aa12.99□□□□□ -0.33
SMAD5-206ENST00000509962 UQCRBP14927 111 aa12.99□□□□□ -0.33
SMAD5-206ENST00000509962 CREB1P16220 341 aa12.99□□□□□ -0.33
SMAD5-206ENST00000509962 IL7RP16871 459 aa12.99□□□□□ -0.33
SMAD5-206ENST00000509962 CDH2P19022 906 aaPredicted RBP12.99□□□□□ -0.33
SMAD5-206ENST00000509962 MPGP29372 298 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms