RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 TMEM121BQ9BXQ6 578 aaPredicted RBP4.71□□□□□ -1.66
PHF3-210ENST00000509876 QRSL1Q9H0R6 528 aaKnown RBP4.71□□□□□ -1.66
PHF3-210ENST00000509876 KAT8Q9H7Z6 458 aaKnown RBP4.71□□□□□ -1.66
PHF3-210ENST00000509876 GRIP1Q9Y3R0 1128 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 TRAV27A0A087WT01 109 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 A0A1W2PQM1 296 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 HMGN4O00479 90 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 C7P10643 843 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 DBTP11182 482 aaKnown RBP4.71□□□□□ -1.66
PHF3-210ENST00000509876 ITGAMP11215 1152 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 F8A1P23610 371 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 ABCD3P28288 659 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 PEBP1P30086 187 aaKnown RBP4.71□□□□□ -1.66
PHF3-210ENST00000509876 SOX8P57073 446 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 KLRB1Q12918 225 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 PPP1R8Q12972 351 aaKnown RBP4.71□□□□□ -1.66
PHF3-210ENST00000509876 ODF4Q2M2E3 257 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 COX20Q5RI15 118 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 PODNL1Q6PEZ8 512 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 ZNF813Q6ZN06 617 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 B3GNT8Q7Z7M8 397 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 FAM109AQ8N4B1 249 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 OR8K3Q8NH51 312 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 ZNF700Q9H0M5 742 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 ADAM18Q9Y3Q7 739 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 A0A1W2PPV9 198 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 PLOD2O00469 737 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 PRODHO43272 600 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 TIMM8AO60220 97 aaPredicted RBP4.71□□□□□ -1.66
PHF3-210ENST00000509876 AGFG2O95081 481 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 DLGAP3O95886 979 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 NID1P14543 1247 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 SELEP16581 610 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 CSF2RBP32927 897 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 THBS2P35442 1172 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 MFAP5Q13361 173 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 GLT8D1Q68CQ7 371 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 PLBD1Q6P4A8 553 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 PTRH1Q86Y79 214 aaKnown RBP4.71□□□□□ -1.66
PHF3-210ENST00000509876 MAML2Q8IZL2 1156 aaPredicted RBP4.71□□□□□ -1.66
PHF3-210ENST00000509876 NAXEQ8NCW5 288 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 OR5M9Q8NGP3 310 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 NKD1Q969G9 470 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 LRFN5Q96NI6 719 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 B3GNT4Q9C0J1 378 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 ZNF226Q9NYT6 803 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 HDGFL3Q9Y3E1 203 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 TEX51A0A1B0GUA7 166 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 LOC110117498-PIK3R3F6TDL0 507 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 IDH3BO43837 385 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 SLC16A7O60669 478 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 NUDT7P0C024 238 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 GRPRP30550 384 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 HTR5AP47898 357 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 ZNF385BQ569K4 471 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 ZNF793Q6ZN11 406 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 SLC35D2Q76EJ3 337 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 WFDC8Q8IUA0 241 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 OR2L13Q8N349 312 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 ASB5Q8WWX0 329 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 OIT3Q8WWZ8 545 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 ASB17Q8WXJ9 295 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 COG8Q96MW5 612 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 LMF1Q96S06 567 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 OR52D1Q9H346 318 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 FN3KQ9H479 309 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 MOV10Q9HCE1 1003 aaKnown RBP4.7□□□□□ -1.66
PHF3-210ENST00000509876 OBP2BQ9NPH6 170 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 PDE4DIPQ5VU43 2346 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 TEX13CA0A0J9YWL9 993 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 A0A1W2PRQ8 180 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 METTL21EPA6NDL7 271 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 F5H5K5 113 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 HRGP04196 525 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 CD59P13987 128 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 CFL1P23528 166 aaKnown RBP4.7□□□□□ -1.66
PHF3-210ENST00000509876 MVKQ03426 396 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 CNN3Q15417 329 aaKnown RBP4.7□□□□□ -1.66
PHF3-210ENST00000509876 MPEG1Q2M385 716 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 PRICKLE4Q2TBC4 344 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 KRTCAP3Q53RY4 240 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 PYDC2Q56P42 97 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 ZNF704Q6ZNC4 412 aaPredicted RBP4.7□□□□□ -1.66
PHF3-210ENST00000509876 ARHGAP22Q7Z5H3 698 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 LRRC18Q8N456 261 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 OR9K2Q8NGE7 335 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 ZNF775Q96BV0 537 aaPredicted RBP4.7□□□□□ -1.66
PHF3-210ENST00000509876 CNRIP1Q96F85 164 aaPredicted RBP4.7□□□□□ -1.66
PHF3-210ENST00000509876 SECISBP2Q96T21 854 aaKnown RBP4.7□□□□□ -1.66
PHF3-210ENST00000509876 HMG20AQ9NP66 347 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 DIABLOQ9NR28 239 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 FAIMQ9NVQ4 179 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 ARMC1Q9NVT9 282 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 FAM90A27PA6NNH2 459 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 ZNF99A8MXY4 864 aaPredicted RBP4.7□□□□□ -1.66
PHF3-210ENST00000509876 H0YAE9 185 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 RBMXL2O75526 392 aaKnown RBP4.7□□□□□ -1.66
PHF3-210ENST00000509876 PRR35P0CG20 571 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 PTGER4P35408 488 aa4.7□□□□□ -1.66
PHF3-210ENST00000509876 ARR3P36575 388 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms