RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 LINGO2Q7L985 606 aa13.91□□□□□ -0.18
RAB40C-202ENST00000509637 FBXL14Q8N1E6 418 aa13.91□□□□□ -0.18
RAB40C-202ENST00000509637 NATD1Q8N6N6 113 aa13.91□□□□□ -0.18
RAB40C-202ENST00000509637 EIF1ADQ8N9N8 165 aaKnown RBP13.91□□□□□ -0.18
RAB40C-202ENST00000509637 SLC25A43Q8WUT9 341 aaPredicted RBP13.91□□□□□ -0.18
RAB40C-202ENST00000509637 TMEM234Q8WY98 164 aa13.91□□□□□ -0.18
RAB40C-202ENST00000509637 FAM168AQ92567 244 aa13.91□□□□□ -0.18
RAB40C-202ENST00000509637 RADILQ96JH8 1075 aa13.91□□□□□ -0.18
RAB40C-202ENST00000509637 ZNF385AQ96PM9 386 aaKnown RBP13.91□□□□□ -0.18
RAB40C-202ENST00000509637 SORCS2Q96PQ0 1159 aa13.91□□□□□ -0.18
RAB40C-202ENST00000509637 SLC38A1Q9H2H9 487 aa13.91□□□□□ -0.18
RAB40C-202ENST00000509637 FAIMQ9NVQ4 179 aa13.91□□□□□ -0.18
RAB40C-202ENST00000509637 TMEM160Q9NX00 188 aa13.91□□□□□ -0.18
RAB40C-202ENST00000509637 ASIC5Q9NY37 505 aa13.91□□□□□ -0.18
RAB40C-202ENST00000509637 POU2F3Q9UKI9 436 aa13.91□□□□□ -0.18
RAB40C-202ENST00000509637 MGAT4BQ9UQ53 548 aa13.91□□□□□ -0.18
RAB40C-202ENST00000509637 WDR45Q9Y484 360 aa13.91□□□□□ -0.18
RAB40C-202ENST00000509637 ATP23Q9Y6H3 246 aa13.91□□□□□ -0.18
RAB40C-202ENST00000509637 TMED7-TICAM2A0A0A6YYA0 188 aa13.9□□□□□ -0.18
RAB40C-202ENST00000509637 DUXAA6NLW8 204 aa13.9□□□□□ -0.18
RAB40C-202ENST00000509637 HMGN4O00479 90 aa13.9□□□□□ -0.18
RAB40C-202ENST00000509637 TYROBPO43914 113 aa13.9□□□□□ -0.18
RAB40C-202ENST00000509637 MRPL33O75394 65 aaKnown RBP13.9□□□□□ -0.18
RAB40C-202ENST00000509637 CHRM4P08173 479 aa13.9□□□□□ -0.18
RAB40C-202ENST00000509637 GUSBP08236 651 aa13.9□□□□□ -0.18
RAB40C-202ENST00000509637 CASP8Q14790 479 aa13.9□□□□□ -0.18
RAB40C-202ENST00000509637 SYPL1Q16563 259 aa13.9□□□□□ -0.18
RAB40C-202ENST00000509637 CYB5R2Q6BCY4 276 aa13.9□□□□□ -0.18
RAB40C-202ENST00000509637 GRINAQ7Z429 371 aa13.9□□□□□ -0.18
RAB40C-202ENST00000509637 CNPY4Q8N129 248 aa13.9□□□□□ -0.18
RAB40C-202ENST00000509637 ZNF781Q8N8C0 355 aa13.9□□□□□ -0.18
RAB40C-202ENST00000509637 OR8J2Q8NGG1 315 aa13.9□□□□□ -0.18
RAB40C-202ENST00000509637 OR4A15Q8NGL6 344 aa13.9□□□□□ -0.18
RAB40C-202ENST00000509637 KIF18AQ8NI77 898 aa13.9□□□□□ -0.18
RAB40C-202ENST00000509637 PKNOX2Q96KN3 472 aa13.9□□□□□ -0.18
RAB40C-202ENST00000509637 PRPF18Q99633 342 aaKnown RBP13.9□□□□□ -0.18
RAB40C-202ENST00000509637 SEC61A2Q9H9S3 476 aa13.9□□□□□ -0.18
RAB40C-202ENST00000509637 PPCSQ9HAB8 311 aa13.9□□□□□ -0.18
RAB40C-202ENST00000509637 EML4Q9HC35 981 aaKnown RBP13.9□□□□□ -0.18
RAB40C-202ENST00000509637 EMC3Q9P0I2 261 aa13.9□□□□□ -0.18
RAB40C-202ENST00000509637 TMEM181Q9P2C4 612 aa13.9□□□□□ -0.18
RAB40C-202ENST00000509637 LGALS13Q9UHV8 139 aa13.9□□□□□ -0.18
RAB40C-202ENST00000509637 CDC42EP3Q9UKI2 254 aa13.9□□□□□ -0.18
RAB40C-202ENST00000509637 MOKQ9UQ07 419 aa13.9□□□□□ -0.18
RAB40C-202ENST00000509637 TMED7Q9Y3B3 224 aa13.9□□□□□ -0.18
RAB40C-202ENST00000509637 HDGFL3Q9Y3E1 203 aa13.9□□□□□ -0.18
RAB40C-202ENST00000509637 IGHV4-61A0A0C4DH41 118 aa13.89□□□□□ -0.19
RAB40C-202ENST00000509637 KLF11O14901 512 aa13.89□□□□□ -0.19
RAB40C-202ENST00000509637 LMX1BO60663 402 aa13.89□□□□□ -0.19
RAB40C-202ENST00000509637 AK1P00568 194 aa13.89□□□□□ -0.19
RAB40C-202ENST00000509637 IGFBP1P08833 259 aaPredicted RBP13.89□□□□□ -0.19
RAB40C-202ENST00000509637 SLC25A16P16260 332 aa13.89□□□□□ -0.19
RAB40C-202ENST00000509637 IL12AP29459 219 aa13.89□□□□□ -0.19
RAB40C-202ENST00000509637 P2RY4P51582 365 aa13.89□□□□□ -0.19
RAB40C-202ENST00000509637 EFNA4P52798 201 aa13.89□□□□□ -0.19
RAB40C-202ENST00000509637 DSCR9P59020 149 aa13.89□□□□□ -0.19
RAB40C-202ENST00000509637 HIKESHIQ53FT3 197 aa13.89□□□□□ -0.19
RAB40C-202ENST00000509637 SPANXN4Q5MJ08 99 aa13.89□□□□□ -0.19
RAB40C-202ENST00000509637 ZNF544Q6NX49 715 aa13.89□□□□□ -0.19
RAB40C-202ENST00000509637 CASP12Q6UXS9 341 aa13.89□□□□□ -0.19
RAB40C-202ENST00000509637 C16orf62Q7Z3J2 963 aa13.89□□□□□ -0.19
RAB40C-202ENST00000509637 TMEM99Q8N816 258 aa13.89□□□□□ -0.19
RAB40C-202ENST00000509637 ZNF563Q8TA94 476 aa13.89□□□□□ -0.19
RAB40C-202ENST00000509637 PIGXQ8TBF5 258 aa13.89□□□□□ -0.19
RAB40C-202ENST00000509637 MSI2Q96DH6 328 aaKnown RBP13.89□□□□□ -0.19
RAB40C-202ENST00000509637 FOXN4Q96NZ1 517 aa13.89□□□□□ -0.19
RAB40C-202ENST00000509637 RSPO3Q9BXY4 272 aaPredicted RBP13.89□□□□□ -0.19
RAB40C-202ENST00000509637 BEX2Q9BXY8 128 aa13.89□□□□□ -0.19
RAB40C-202ENST00000509637 TRAPPC4Q9Y296 219 aa13.89□□□□□ -0.19
RAB40C-202ENST00000509637 GPR171O14626 319 aa13.88□□□□□ -0.19
RAB40C-202ENST00000509637 USF1P22415 310 aaPredicted RBP13.88□□□□□ -0.19
RAB40C-202ENST00000509637 UQCRC2P22695 453 aa13.88□□□□□ -0.19
RAB40C-202ENST00000509637 TACR3P29371 465 aa13.88□□□□□ -0.19
RAB40C-202ENST00000509637 APOBEC3AP31941 199 aaPredicted RBP13.88□□□□□ -0.19
RAB40C-202ENST00000509637 CDKN2CP42773 168 aa13.88□□□□□ -0.19
RAB40C-202ENST00000509637 LSM11P83369 360 aaKnown RBP eCLIP13.88□□□□□ -0.19
RAB40C-202ENST00000509637 PDCD2Q16342 344 aaPredicted RBP13.88□□□□□ -0.19
RAB40C-202ENST00000509637 COX20Q5RI15 118 aa13.88□□□□□ -0.19
RAB40C-202ENST00000509637 KLHL17Q6TDP4 642 aa13.88□□□□□ -0.19
RAB40C-202ENST00000509637 ANKS4BQ8N8V4 417 aa13.88□□□□□ -0.19
RAB40C-202ENST00000509637 PROX1Q92786 737 aa13.88□□□□□ -0.19
RAB40C-202ENST00000509637 FBXO17Q96EF6 278 aa13.88□□□□□ -0.19
RAB40C-202ENST00000509637 NEURL3Q96EH8 262 aa13.88□□□□□ -0.19
RAB40C-202ENST00000509637 SORT1Q99523 831 aa13.88□□□□□ -0.19
RAB40C-202ENST00000509637 C19orf24Q9BVV8 132 aa13.88□□□□□ -0.19
RAB40C-202ENST00000509637 ADAM19Q9H013 955 aa13.88□□□□□ -0.19
RAB40C-202ENST00000509637 NELFAQ9H3P2 528 aa13.88□□□□□ -0.19
RAB40C-202ENST00000509637 EXOSC3Q9NQT5 275 aaKnown RBP13.88□□□□□ -0.19
RAB40C-202ENST00000509637 DCTN4Q9UJW0 460 aa13.88□□□□□ -0.19
RAB40C-202ENST00000509637 SLC35A3Q9Y2D2 325 aa13.88□□□□□ -0.19
RAB40C-202ENST00000509637 CHST2Q9Y4C5 530 aa13.88□□□□□ -0.19
RAB40C-202ENST00000509637 NBEAL1Q6ZS30 2694 aa13.87□□□□□ -0.19
RAB40C-202ENST00000509637 IGHV1-18A0A0C4DH31 117 aa13.87□□□□□ -0.19
RAB40C-202ENST00000509637 PRSS51A0A1B0GVH4 220 aa13.87□□□□□ -0.19
RAB40C-202ENST00000509637 WDR91A4D1P6 747 aa13.87□□□□□ -0.19
RAB40C-202ENST00000509637 DNPH1O43598 174 aa13.87□□□□□ -0.19
RAB40C-202ENST00000509637 AKR7A3O95154 331 aa13.87□□□□□ -0.19
RAB40C-202ENST00000509637 RPS4Y1P22090 263 aaKnown RBP13.87□□□□□ -0.19
RAB40C-202ENST00000509637 CLK1P49759 484 aaKnown RBP13.87□□□□□ -0.19
RAB40C-202ENST00000509637 BNIP2Q12982 314 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms