RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 SLC38A1Q9H2H9 487 aa11.68□□□□□ -0.54
DDX41-210ENST00000509576 NELFAQ9H3P2 528 aa11.68□□□□□ -0.54
DDX41-210ENST00000509576 ATAD3AQ9NVI7 634 aa11.68□□□□□ -0.54
DDX41-210ENST00000509576 ASIC5Q9NY37 505 aa11.68□□□□□ -0.54
DDX41-210ENST00000509576 OSGIN1Q9UJX0 560 aa11.68□□□□□ -0.54
DDX41-210ENST00000509576 MOKQ9UQ07 419 aa11.68□□□□□ -0.54
DDX41-210ENST00000509576 MGAT4BQ9UQ53 548 aa11.68□□□□□ -0.54
DDX41-210ENST00000509576 TLDC2A0PJX2 215 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 HMGN4O00479 90 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 RNASET2O00584 256 aaKnown RBP11.67□□□□□ -0.54
DDX41-210ENST00000509576 CHRM4P08173 479 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 SLC25A16P16260 332 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 MAPK1P28482 360 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 APOBEC1P41238 236 aaKnown RBP11.67□□□□□ -0.54
DDX41-210ENST00000509576 IDH2P48735 452 aaKnown RBP11.67□□□□□ -0.54
DDX41-210ENST00000509576 EFNA4P52798 201 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 OR2B6P58173 313 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 CSNK2A1P68400 391 aaPredicted RBP11.67□□□□□ -0.54
DDX41-210ENST00000509576 EMX2Q04743 252 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 CASP8Q14790 479 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 RAB35Q15286 201 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 SYPL1Q16563 259 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 HIKESHIQ53FT3 197 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 ZNF544Q6NX49 715 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 CASP12Q6UXS9 341 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 EIF3MQ7L2H7 374 aaKnown RBP11.67□□□□□ -0.54
DDX41-210ENST00000509576 GRINAQ7Z429 371 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 ANKS4BQ8N8V4 417 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 OR8J2Q8NGG1 315 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 XAGE5Q8WWM1 108 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 TMEM234Q8WY98 164 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 TUBGCP3Q96CW5 907 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 PKNOX2Q96KN3 472 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 RSPO3Q9BXY4 272 aaPredicted RBP11.67□□□□□ -0.54
DDX41-210ENST00000509576 AKTIPQ9H8T0 292 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 EMC3Q9P0I2 261 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 LGALS13Q9UHV8 139 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 MID2Q9UJV3 735 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 POU2F3Q9UKI9 436 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 HDGFL3Q9Y3E1 203 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 WDR45Q9Y484 360 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 ATP23Q9Y6H3 246 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 DYSFO75923 2080 aa11.67□□□□□ -0.54
DDX41-210ENST00000509576 TMED7-TICAM2A0A0A6YYA0 188 aa11.66□□□□□ -0.54
DDX41-210ENST00000509576 IGHV1-18A0A0C4DH31 117 aa11.66□□□□□ -0.54
DDX41-210ENST00000509576 KLF11O14901 512 aa11.66□□□□□ -0.54
DDX41-210ENST00000509576 TYROBPO43914 113 aa11.66□□□□□ -0.54
DDX41-210ENST00000509576 LMX1BO60663 402 aa11.66□□□□□ -0.54
DDX41-210ENST00000509576 MRPL33O75394 65 aaKnown RBP11.66□□□□□ -0.54
DDX41-210ENST00000509576 BPGMP07738 259 aa11.66□□□□□ -0.54
DDX41-210ENST00000509576 GUSBP08236 651 aa11.66□□□□□ -0.54
DDX41-210ENST00000509576 RPS4Y1P22090 263 aaKnown RBP11.66□□□□□ -0.54
DDX41-210ENST00000509576 USF1P22415 310 aaPredicted RBP11.66□□□□□ -0.54
DDX41-210ENST00000509576 IL12AP29459 219 aa11.66□□□□□ -0.54
DDX41-210ENST00000509576 CDKN2CP42773 168 aa11.66□□□□□ -0.54
DDX41-210ENST00000509576 DSCR9P59020 149 aa11.66□□□□□ -0.54
DDX41-210ENST00000509576 KCNJ10P78508 379 aa11.66□□□□□ -0.54
DDX41-210ENST00000509576 LSM11P83369 360 aaKnown RBP eCLIP11.66□□□□□ -0.54
DDX41-210ENST00000509576 PDCD2Q16342 344 aaPredicted RBP11.66□□□□□ -0.54
DDX41-210ENST00000509576 SPANXN4Q5MJ08 99 aa11.66□□□□□ -0.54
DDX41-210ENST00000509576 CYB5R2Q6BCY4 276 aa11.66□□□□□ -0.54
DDX41-210ENST00000509576 C16orf62Q7Z3J2 963 aa11.66□□□□□ -0.54
DDX41-210ENST00000509576 TMEM99Q8N816 258 aa11.66□□□□□ -0.54
DDX41-210ENST00000509576 ZNF781Q8N8C0 355 aa11.66□□□□□ -0.54
DDX41-210ENST00000509576 OR4A15Q8NGL6 344 aa11.66□□□□□ -0.54
DDX41-210ENST00000509576 PIGXQ8TBF5 258 aa11.66□□□□□ -0.54
DDX41-210ENST00000509576 NEURL3Q96EH8 262 aa11.66□□□□□ -0.54
DDX41-210ENST00000509576 C1orf159Q96HA4 380 aa11.66□□□□□ -0.54
DDX41-210ENST00000509576 EML4Q9HC35 981 aaKnown RBP11.66□□□□□ -0.54
DDX41-210ENST00000509576 EXOSC3Q9NQT5 275 aaKnown RBP11.66□□□□□ -0.54
DDX41-210ENST00000509576 SERINC1Q9NRX5 453 aa11.66□□□□□ -0.54
DDX41-210ENST00000509576 TMEM181Q9P2C4 612 aa11.66□□□□□ -0.54
DDX41-210ENST00000509576 TMED7Q9Y3B3 224 aa11.66□□□□□ -0.54
DDX41-210ENST00000509576 CHST2Q9Y4C5 530 aa11.66□□□□□ -0.54
DDX41-210ENST00000509576 ZNF503-AS2A6NEH8 195 aa11.65□□□□□ -0.54
DDX41-210ENST00000509576 DNPH1O43598 174 aa11.65□□□□□ -0.54
DDX41-210ENST00000509576 CPSF4O95639 269 aaKnown RBP11.65□□□□□ -0.54
DDX41-210ENST00000509576 AK1P00568 194 aa11.65□□□□□ -0.54
DDX41-210ENST00000509576 TACR3P29371 465 aa11.65□□□□□ -0.54
DDX41-210ENST00000509576 IL2RGP31785 369 aa11.65□□□□□ -0.54
DDX41-210ENST00000509576 NR4A2P43354 598 aa11.65□□□□□ -0.54
DDX41-210ENST00000509576 TUBA1BP68363 451 aa11.65□□□□□ -0.54
DDX41-210ENST00000509576 TUBA4AP68366 448 aa11.65□□□□□ -0.54
DDX41-210ENST00000509576 COX20Q5RI15 118 aa11.65□□□□□ -0.54
DDX41-210ENST00000509576 FAM120AOSQ5T036 256 aa11.65□□□□□ -0.54
DDX41-210ENST00000509576 KLHL17Q6TDP4 642 aa11.65□□□□□ -0.54
DDX41-210ENST00000509576 TUBA1AQ71U36 451 aa11.65□□□□□ -0.54
DDX41-210ENST00000509576 CNPY4Q8N129 248 aa11.65□□□□□ -0.54
DDX41-210ENST00000509576 NATD1Q8N6N6 113 aa11.65□□□□□ -0.54
DDX41-210ENST00000509576 EIF1ADQ8N9N8 165 aaKnown RBP11.65□□□□□ -0.54
DDX41-210ENST00000509576 ZNF563Q8TA94 476 aa11.65□□□□□ -0.54
DDX41-210ENST00000509576 PROX1Q92786 737 aa11.65□□□□□ -0.54
DDX41-210ENST00000509576 FBXO17Q96EF6 278 aa11.65□□□□□ -0.54
DDX41-210ENST00000509576 FOXN4Q96NZ1 517 aa11.65□□□□□ -0.54
DDX41-210ENST00000509576 SORT1Q99523 831 aa11.65□□□□□ -0.54
DDX41-210ENST00000509576 BEX2Q9BXY8 128 aa11.65□□□□□ -0.54
DDX41-210ENST00000509576 CHODLQ9H9P2 273 aa11.65□□□□□ -0.54
DDX41-210ENST00000509576 PPCSQ9HAB8 311 aa11.65□□□□□ -0.54
DDX41-210ENST00000509576 SLC6A13Q9NSD5 602 aa11.65□□□□□ -0.54
DDX41-210ENST00000509576 RLIMQ9NVW2 624 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms