RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 SGCAQ16586 387 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 ZNF239Q16600 458 aaKnown RBP4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 TSTQ16762 297 aaKnown RBP4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 MPEG1Q2M385 716 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 TTLL9Q3SXZ7 439 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 LGALSLQ3ZCW2 172 aaPredicted RBP4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 XKR9Q5GH70 373 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 ENTPD8Q5MY95 495 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 Q5PR19 223 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 PRAMEF19Q5SWL8 479 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 IDNKQ5T6J7 187 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 HIST2H2AA3Q6FI13 130 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 OR4F3Q6IEY1 312 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 EIF5AL1Q6IS14 154 aaKnown RBP4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 APOBEC3HQ6NTF7 200 aaKnown RBP4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 ZNF730Q6ZMV8 503 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 RNF165Q6ZSG1 346 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 TPGS1Q6ZTW0 290 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 OAFQ86UD1 273 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 ANKRD46Q86W74 232 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 LRRC28Q86X40 367 aaPredicted RBP4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 ZDHHC21Q8IVQ6 265 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 LAX1Q8IWV1 398 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 FAM217AQ8IXS0 508 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 C4orf19Q8IY42 314 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 TEX19Q8NA77 164 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 ATP6V1C2Q8NEY4 427 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 GPRC5AQ8NFJ5 357 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 PXT1Q8NFP0 134 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 BEST4Q8NFU0 473 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 IPMKQ8NFU5 416 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 OR5M9Q8NGP3 310 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 OR2T35Q8NGX2 323 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 MOSPD2Q8NHP6 518 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 RPLP0P6Q8NHW5 317 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 ZNF461Q8TAF7 563 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 THAP6Q8TBB0 222 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 PHOSPHO2Q8TCD6 241 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 SMAP2Q8WU79 429 aaPredicted RBP4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 ARNTL2Q8WYA1 636 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 DNASE2BQ8WZ79 361 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 NR4A3Q92570 626 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 OSTF1Q92882 214 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 NTAN1Q96AB6 310 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 EXOSC8Q96B26 276 aaKnown RBP4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 UPRTQ96BW1 309 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 GFM1Q96RP9 751 aaKnown RBP4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 PRRG3Q9BZD7 231 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 HDHD2Q9H0R4 259 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 MAGEH1Q9H213 219 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 PORCNQ9H237 461 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 OR51E2Q9H255 320 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 TFB2MQ9H5Q4 396 aaKnown RBP4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 CACYBPQ9HB71 228 aaKnown RBP4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 ABCB9Q9NP78 766 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 HEBP1Q9NRV9 189 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 NLE1Q9NVX2 485 aaPredicted RBP4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 TAS2R3Q9NYW6 316 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 CALML5Q9NZT1 146 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 FEM1BQ9UK73 627 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 SCML1Q9UN30 329 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 RPL36Q9Y3U8 105 aaKnown RBP4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 PTGDR2Q9Y5Y4 395 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 SLC22A7Q9Y694 548 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 STYXL1Q9Y6J8 313 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 LRRC37A2A6NM11 1700 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 RIF1Q5UIP0 2472 aaKnown RBP4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 IGLV3-22A0A075B6J6 115 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 IGKV6D-41A0A0C4DH26 115 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 A0A0D9SG52 128 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 TEX13CA0A0J9YWL9 993 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 ZCWPW2A0A1B0GU75 182 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 A0A1B0GUH1 482 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 A0A1B0GVT2 93 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 GXYLT2A0PJZ3 443 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 OR6C74A6NCV1 312 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 METTL21EPA6NDL7 271 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 C5orf52A6NGY3 159 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 RFPL4AA6NLU0 287 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 EFCAB7A8K855 629 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 SNRPGP15A8MWD9 76 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 INAFM1C9JVW0 142 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 NEDD8-MDP1E9PL57 170 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 FAM86B1E9PN63 330 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 E9PQ18 207 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 RFPL4AL1F8VTS6 287 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 BLOC1S5-TXNDC5H3BN57 136 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 WWP2O00308 870 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 GPR171O14626 319 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 MEIS2O14770 477 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 CREG1O75629 220 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 ANXA9O76027 345 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 KDM4BO94953 1096 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 GADD45GO95257 159 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 F10P00742 488 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 TIMP1P01033 207 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 MBP02144 154 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 KLKB1P03952 638 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 HEXBP07686 556 aa4.18□□□□□ -1.74
PDLIM5-211ENST00000508531 ALDOCP09972 364 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms