RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 ERLIN1O75477 346 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 TUSC2O75896 110 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 ZWINTO95229 277 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 UTS2O95399 124 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 CPSF4O95639 269 aaKnown RBP4.09□□□□□ -1.75
NUP54-206ENST00000508465 C6orf47O95873 294 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 HRGP04196 525 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 TUBBP07437 444 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 ACP2P11117 423 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 PRPS2P11908 318 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 PRPS1L1P21108 318 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 PTPN6P29350 595 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 KRT20P35900 424 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 SERPINB5P36952 375 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 HPCAL1P37235 193 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 GSTM5P46439 218 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 ASMTP46597 345 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 CCT3P49368 545 aaKnown RBP4.09□□□□□ -1.75
NUP54-206ENST00000508465 TMED10P49755 219 aaKnown RBP4.09□□□□□ -1.75
NUP54-206ENST00000508465 DGKQP52824 942 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 GAS1P54826 345 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 DCAF7P61962 342 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 RPP38P78345 283 aaKnown RBP4.09□□□□□ -1.75
NUP54-206ENST00000508465 MRPS22P82650 360 aaKnown RBP4.09□□□□□ -1.75
NUP54-206ENST00000508465 PSG6Q00889 435 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 EMX2Q04743 252 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 PDE7AQ13946 482 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 CASP8Q14790 479 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 CEBPEQ15744 281 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 DUSP5Q16690 384 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 ZNF630Q2M218 657 aaPredicted RBP4.09□□□□□ -1.75
NUP54-206ENST00000508465 C3orf36Q3SXR2 165 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 ATP6AP1LQ52LC2 224 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 XKR7Q5GH72 579 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 C10orf25Q5T742 122 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 WLSQ5T9L3 541 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 RNF220Q5VTB9 566 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 TMEM211Q6ICI0 200 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 OR4F3Q6IEY1 312 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 SLC30A6Q6NXT4 461 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 MTFR2Q6P444 385 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 IKBIPQ70UQ0 350 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 OLIG3Q7RTU3 272 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 ANKRD46Q86W74 232 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 PLCZ1Q86YW0 608 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 RIMKLAQ8IXN7 391 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 DND1Q8IYX4 353 aaKnown RBP4.09□□□□□ -1.75
NUP54-206ENST00000508465 CLECL1Q8IZS7 167 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 OR2L13Q8N349 312 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 GATSQ8NAP1 163 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 C17orf47Q8NEP4 570 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 TNIP2Q8NFZ5 429 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 OR5AK3PQ8NH89 298 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 OR14L1PQ8NHC6 308 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 LILRB4Q8NHJ6 448 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 CEP70Q8NHQ1 597 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 CA5BP1Q8WTZ4 195 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 XAGE5Q8WWM1 108 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 ZNF75CPQ92670 426 aaPredicted RBP4.09□□□□□ -1.75
NUP54-206ENST00000508465 RND1Q92730 232 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 CDS1Q92903 461 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 ABTB1Q969K4 478 aaPredicted RBP4.09□□□□□ -1.75
NUP54-206ENST00000508465 TLCD1Q96CP7 247 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 NTNG2Q96CW9 530 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 TMCO6Q96DC7 493 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 ERP27Q96DN0 273 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 ZBED6CLQ96FA7 236 aaPredicted RBP4.09□□□□□ -1.75
NUP54-206ENST00000508465 CHMP6Q96FZ7 201 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 RMND5BQ96G75 393 aaPredicted RBP4.09□□□□□ -1.75
NUP54-206ENST00000508465 SLC35A4Q96G79 324 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 WDYHV1Q96HA8 205 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 METTL2AQ96IZ6 378 aaKnown RBP4.09□□□□□ -1.75
NUP54-206ENST00000508465 SNX18Q96RF0 628 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 SECISBP2Q96T21 854 aaKnown RBP4.09□□□□□ -1.75
NUP54-206ENST00000508465 KLHDC3Q9BQ90 382 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 TTYH2Q9BSA4 534 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 OSBPL11Q9BXB4 747 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 UGT2B28Q9BY64 529 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 UBQLN3Q9H347 655 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 TP63Q9H3D4 680 aaPredicted RBP4.09□□□□□ -1.75
NUP54-206ENST00000508465 CXorf36Q9H7Y0 433 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 C3orf14Q9HBI5 128 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 ACKR4Q9NPB9 350 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 SIRT3Q9NTG7 399 aaPredicted RBP4.09□□□□□ -1.75
NUP54-206ENST00000508465 MRPS18AQ9NVS2 196 aaKnown RBP4.09□□□□□ -1.75
NUP54-206ENST00000508465 GIN1Q9NXP7 522 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 TAS2R10Q9NYW0 307 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 MARCOQ9UEW3 520 aaPredicted RBP4.09□□□□□ -1.75
NUP54-206ENST00000508465 ATP6V1HQ9UI12 483 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 EIF3LQ9Y262 564 aaKnown RBP4.09□□□□□ -1.75
NUP54-206ENST00000508465 TMED5Q9Y3A6 229 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 RAP2CQ9Y3L5 183 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 FAM215AQ9Y5M1 114 aa4.09□□□□□ -1.75
NUP54-206ENST00000508465 DOPEY1Q5JWR5 2465 aa4.09□□□□□ -1.76
NUP54-206ENST00000508465 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 NPIPA5A0A0B4J1W7 369 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 NPIPA7E9PJI5 369 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 H0YC42 278 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 H3BNX3 289 aa4.08□□□□□ -1.76
NUP54-206ENST00000508465 SDHDO14521 159 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms