RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 TOR1AO14656 332 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 ARPC1BO15143 372 aaKnown RBP4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 TGM5O43548 720 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 PIP5K1CO60331 668 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 DNAJB6O75190 326 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 PPM1BO75688 479 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 SLC2A10O95528 541 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 WNT1P04628 370 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 HIST1H2ABP04908 130 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 ALDOBP05062 364 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 C8AP07357 584 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 GUSBP08236 651 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 CSF1P09603 554 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 TACSTD2P09758 323 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 UBBP0CG47 229 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 UBCP0CG48 685 aaKnown RBP4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 EPCAMP16422 314 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 ATF1P18846 271 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 RAB3AP20336 220 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 SLC2A5P22732 501 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 EDNRAP25101 427 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 SSTR2P30874 369 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 VEGFCP49767 419 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 TPMTP51580 245 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 ART1P52961 327 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 CCL23P55773 120 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 SEC61A1P61619 476 aaKnown RBP4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 RPS27AP62979 156 aaKnown RBP4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 UBA52P62987 128 aaKnown RBP4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 EEF1A1P68104 462 aaKnown RBP4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 SIRPAP78324 504 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 E2F1Q01094 437 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 ZNF85Q03923 595 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 CRYZQ08257 329 aaKnown RBP4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 FGL1Q08830 312 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 FZD5Q13467 585 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 HTR4Q13639 388 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 IL10RAQ13651 578 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 GGTLC2Q14390 218 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 INSL4Q14641 139 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 GPNMBQ14956 572 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 PON3Q15166 354 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 IRF4Q15306 451 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 RBMS2Q15434 407 aaKnown RBP4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 OR1Q1Q15612 314 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 ISXQ2M1V0 245 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 SLC25A35Q3KQZ1 300 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 FNDC3BQ53EP0 1204 aaKnown RBP4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 CCDC157Q569K6 752 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 LY6G5CQ5SRR4 150 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 TMEM69Q5SWH9 247 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 CST9Q5W186 159 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 ZNF626Q68DY1 528 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 SLC25A25Q6KCM7 469 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 RGS7BPQ6MZT1 257 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 ALKBH2Q6NS38 261 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 TMEM81Q6P7N7 255 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 CNKSR3Q6P9H4 555 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 ZC3H14Q6PJT7 736 aaKnown RBP4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 SEZ6L2Q6UXD5 910 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 UNQ9370/PRO34162Q6UXP9 181 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 TFAP2EQ6VUC0 442 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 B3GLCTQ6Y288 498 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 ZNF793Q6ZN11 406 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 ZNF836Q6ZNA1 936 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 FRRS1Q6ZNA5 592 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 HIST3H2AQ7L7L0 130 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 FAM220AQ7Z4H9 259 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 TMEM17Q86X19 198 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 SLC35F3Q8IY50 421 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 STPG2Q8N412 459 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 C2orf73Q8N5S3 287 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 MFSD9Q8NBP5 474 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 KREMEN2Q8NCW0 462 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 DNAAF1Q8NEP3 725 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 OR13H1Q8NG92 308 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 OR11G2Q8NGC1 345 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 OR4K14Q8NGD5 310 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 OR10Z1Q8NGY1 313 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 OR51Q1Q8NH59 317 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 LGALS14Q8TCE9 139 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 SNX33Q8WV41 574 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 ST8SIA4Q92187 359 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 HSD17B8Q92506 261 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 CNOT9Q92600 299 aaKnown RBP4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 CDS1Q92903 461 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 HIST1H2ACQ93077 130 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 PTP4A1Q93096 173 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 KISS1RQ969F8 398 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 GAL3ST3Q96A11 431 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 PNPLA2Q96AD5 504 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 BPIFA2Q96DR5 249 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 CNRIP1Q96F85 164 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 SLC35A4Q96G79 324 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 C16orf58Q96GQ5 468 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 COX14Q96I36 57 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 PGLYRP3Q96LB9 341 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 FERD3LQ96RJ6 166 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 MYADMQ96S97 322 aa4.58□□□□□ -1.68
HMGB3P16-201ENST00000508037 STACQ99469 402 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms