RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 DIRAS1O95057 198 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 AP2A1O95782 977 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 DNAH10OSP0CZ25 163 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 CD1EP15812 388 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 ELK1P19419 428 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 CALRP27797 417 aaKnown RBP2.38□□□□□ -2.03
LSM6-205ENST00000507449 UGT1A5P35504 534 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 RBMXP38159 391 aaKnown RBP2.38□□□□□ -2.03
LSM6-205ENST00000507449 NOVP48745 357 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 CCT3P49368 545 aaKnown RBP2.38□□□□□ -2.03
LSM6-205ENST00000507449 KLK7P49862 253 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 PLK1P53350 603 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 AIF1P55008 147 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 ZNF763Q0D2J5 394 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 SLC15A2Q16348 729 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 IL17AQ16552 155 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 EXOC3L2Q2M3D2 409 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 RSBN1Q5VWQ0 802 aaPredicted RBP2.38□□□□□ -2.03
LSM6-205ENST00000507449 ARCQ7LC44 396 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 PRSS41Q7RTY9 318 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 DHDDSQ86SQ9 333 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 TMEM252Q8N6L7 170 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 ALLCQ8N6M5 410 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 EIF1ADQ8N9N8 165 aaKnown RBP2.38□□□□□ -2.03
LSM6-205ENST00000507449 ST8SIA1Q92185 356 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 PHYHIPLQ96FC7 376 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 B3GALT6Q96L58 329 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 RNF2Q99496 336 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 ARHGDIGQ99819 225 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 PARD6BQ9BYG5 372 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 CD274Q9NZQ7 290 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 KIF25Q9UIL4 384 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 ADAM28Q9UKQ2 775 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 STAP1Q9ULZ2 295 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 ASB3Q9Y575 518 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 TTC21BQ7Z4L5 1316 aa2.38□□□□□ -2.03
LSM6-205ENST00000507449 A0A0J9YXY3 114 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 ZNF780AO75290 641 aaPredicted RBP2.37□□□□□ -2.03
LSM6-205ENST00000507449 ATP5LO75964 103 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 OPN1MWP04001 364 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 OPN1MW2P0DN77 364 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 OPN1MW3P0DN78 364 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 FUT3P21217 361 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 HMGB2P26583 209 aaKnown RBP2.37□□□□□ -2.03
LSM6-205ENST00000507449 TAGLN2P37802 199 aaKnown RBP2.37□□□□□ -2.03
LSM6-205ENST00000507449 MAGEA8P43361 318 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 CAV2P51636 162 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 BCL7AQ4VC05 210 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 DMRTC1Q5HYR2 192 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 LCE3EQ5T5B0 92 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 KDELC1Q6UW63 502 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 UQCC3Q6UW78 93 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 RFLNAQ6ZTI6 216 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 VRK2Q86Y07 508 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 ERI1Q8IV48 349 aaKnown RBP2.37□□□□□ -2.03
LSM6-205ENST00000507449 CCDC71LQ8N9Z2 235 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 OR4K14Q8NGD5 310 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 OR2AP1Q8NGE2 309 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 OR9A1PQ8NGU1 263 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 FAM110BQ8TC76 370 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 SCFD1Q8WVM8 642 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 HTR3CQ8WXA8 447 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 FGF11Q92914 225 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 UBE2E3Q969T4 207 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 MARC2Q969Z3 335 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 EFHD2Q96C19 240 aaPredicted RBP2.37□□□□□ -2.03
LSM6-205ENST00000507449 RPUSD4Q96CM3 377 aaKnown RBP2.37□□□□□ -2.03
LSM6-205ENST00000507449 OXGR1Q96P68 337 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 NPY6RQ99463 290 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 EBF4Q9BQW3 602 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 SUDS3Q9H7L9 328 aaPredicted RBP2.37□□□□□ -2.03
LSM6-205ENST00000507449 YY1AP1Q9H869 796 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 ZDHHC11Q9H8X9 412 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 HOXC10Q9NYD6 342 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 CDH9Q9ULB4 789 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 ATP10AO60312 1499 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 LRRK1Q38SD2 2015 aa2.37□□□□□ -2.03
LSM6-205ENST00000507449 THSD7BQ9C0I4 1608 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 IGHV1OR21-1A0A087WYE8 117 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 A0A0G2JLM5 398 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 PSMB11A5LHX3 300 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 SNTNA6NMZ2 147 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 FOXE1O00358 373 aaPredicted RBP2.36□□□□□ -2.03
LSM6-205ENST00000507449 EMC8O43402 210 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 MBTPS2O43462 519 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 MMP23AO75900 390 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 SCGNO76038 276 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 SUPT7LO94864 414 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 DDOSTP39656 456 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 RPL13AP40429 203 aaKnown RBP2.36□□□□□ -2.03
LSM6-205ENST00000507449 ATP1B3P54709 279 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 APOC4P55056 127 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 CSNK1G2P78368 415 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 TNFRSF17Q02223 184 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 FGL1Q08830 312 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 ARL6IP1Q15041 203 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 DPYSL2Q16555 572 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 DUSP7Q16829 419 aa2.36□□□□□ -2.03
LSM6-205ENST00000507449 ZNF630Q2M218 657 aaPredicted RBP2.36□□□□□ -2.03
LSM6-205ENST00000507449 LRRC23Q53EV4 343 aaPredicted RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms