RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 TRIP10Q15642 601 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 TSPO2Q5TGU0 170 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 LIPMQ5VYY2 423 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 TMPPEQ6ZT21 453 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 SSX8Q7RTT4 187 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 MTDHQ86UE4 582 aaKnown RBP5.02□□□□□ -1.61
GYPB-208ENST00000507009 DDIASQ8IXT1 998 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 CLEC4FQ8N1N0 589 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 LINC01356Q8N9X3 169 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 ZNF540Q8NDQ6 660 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 OR7A2PQ8NGA2 310 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 OR2T11Q8NH01 316 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 FAM76AQ8TAV0 307 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 PIGXQ8TBF5 258 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 AGR3Q8TD06 166 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 HOXB13Q92826 284 aaPredicted RBP5.02□□□□□ -1.61
GYPB-208ENST00000507009 ARL5BQ96KC2 179 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 MUS81Q96NY9 551 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 OR7D2Q96RA2 312 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 ACTRT3Q9BYD9 372 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 RAB1BQ9H0U4 201 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 TPK1Q9H3S4 243 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 DYNLRB1Q9NP97 96 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 DUSP22Q9NRW4 184 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 CA10Q9NS85 328 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 SIRT3Q9NTG7 399 aaPredicted RBP5.02□□□□□ -1.61
GYPB-208ENST00000507009 C1orf109Q9NX04 203 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 TBK1Q9UHD2 729 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 EGFL7Q9UHF1 273 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 MKLN1Q9UL63 735 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 SPIN1Q9Y657 262 aaPredicted RBP5.02□□□□□ -1.61
GYPB-208ENST00000507009 ARFGEF3Q5TH69 2177 aa5.02□□□□□ -1.61
GYPB-208ENST00000507009 IGKV3D-15A0A087WSY6 115 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 A0A096LPE4 126 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 IGHV1-18A0A0C4DH31 117 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 A0A1W2PPZ6 126 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 ZNF716A6NP11 495 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 NR5A2O00482 541 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 C6orf47O95873 294 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 LGI1O95970 557 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 CRYAAP02489 173 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 KRT16P08779 473 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 IFI6P09912 130 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 H2AFB1P0C5Y9 115 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 H2AFB2P0C5Z0 115 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 UROSP10746 265 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 LAMP1P11279 417 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 CDH15P55291 814 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 UBE2NP61088 152 aaKnown RBP5.01□□□□□ -1.61
GYPB-208ENST00000507009 IL1RL1Q01638 556 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 TGFBR3Q03167 851 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 LGALS3BPQ08380 585 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 SKP2Q13309 424 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 KIAA0040Q15053 153 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 ADIPOQQ15848 244 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 ADRM1Q16186 407 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 RFTN2Q52LD8 501 aaPredicted RBP5.01□□□□□ -1.61
GYPB-208ENST00000507009 SLC25A53Q5H9E4 307 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 ZCCHC12Q6PEW1 402 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 ZYG11AQ6WRX3 759 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 SYT10Q6XYQ8 523 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 FRMD7Q6ZUT3 714 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 AAED1Q7RTV5 226 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 C16orf62Q7Z3J2 963 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 SPATA21Q7Z572 469 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 PEG10Q86TG7 708 aaKnown RBP5.01□□□□□ -1.61
GYPB-208ENST00000507009 GPAT4Q86UL3 456 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 GLCCI1Q86VQ1 547 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 C17orf53Q8N3J3 647 aaPredicted RBP5.01□□□□□ -1.61
GYPB-208ENST00000507009 SVOPLQ8N434 492 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 SGMS2Q8NHU3 365 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 ZNF418Q8TF45 676 aaPredicted RBP5.01□□□□□ -1.61
GYPB-208ENST00000507009 SLC25A43Q8WUT9 341 aaPredicted RBP5.01□□□□□ -1.61
GYPB-208ENST00000507009 WDR60Q8WVS4 1066 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 TMEM234Q8WY98 164 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 ST8SIA1Q92185 356 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 ZMYND19Q96E35 227 aaPredicted RBP5.01□□□□□ -1.61
GYPB-208ENST00000507009 AURKBQ96GD4 344 aaPredicted RBP5.01□□□□□ -1.61
GYPB-208ENST00000507009 SLC38A2Q96QD8 506 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 STACQ99469 402 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 FMO2Q99518 471 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 CCT7Q99832 543 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 NAA11Q9BSU3 229 aaPredicted RBP5.01□□□□□ -1.61
GYPB-208ENST00000507009 C1orf50Q9BV19 199 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 LAT2Q9GZY6 243 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 SEC61A2Q9H9S3 476 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 MYOZ1Q9NP98 299 aaPredicted RBP5.01□□□□□ -1.61
GYPB-208ENST00000507009 ACSS1Q9NUB1 689 aaPredicted RBP5.01□□□□□ -1.61
GYPB-208ENST00000507009 ACER3Q9NUN7 267 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 MALT1Q9UDY8 824 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 CHRNA9Q9UGM1 479 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 ZNF180Q9UJW8 692 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 WBP11Q9Y2W2 641 aaKnown RBP5.01□□□□□ -1.61
GYPB-208ENST00000507009 CCL27Q9Y4X3 112 aa5.01□□□□□ -1.61
GYPB-208ENST00000507009 A0A1W2PPM1 405 aa5□□□□□ -1.61
GYPB-208ENST00000507009 OR6C65A6NJZ3 312 aa5□□□□□ -1.61
GYPB-208ENST00000507009 SMIM23A6NLE4 172 aa5□□□□□ -1.61
GYPB-208ENST00000507009 B9A039 149 aa5□□□□□ -1.61
GYPB-208ENST00000507009 G3V2L1 256 aa5□□□□□ -1.61
GYPB-208ENST00000507009 AZIN1O14977 448 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms