RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 ZNF300Q96RE9 604 aaPredicted RBP11.53□□□□□ -0.56
TCOF1-210ENST00000506767 DMRTA2Q96SC8 542 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 VKORC1Q9BQB6 163 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 ZNF426Q9BUY5 554 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 TRIM15Q9C019 465 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 OR11A1Q9GZK7 315 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 MAGIXQ9H6Y5 334 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 CALHM2Q9HA72 323 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 IL1RAPQ9NPH3 570 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 PAQR5Q9NXK6 330 aaPredicted RBP11.53□□□□□ -0.56
TCOF1-210ENST00000506767 ALKBH4Q9NXW9 302 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 CLCF1Q9UBD9 225 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 SLC7A7Q9UM01 511 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 MEMO1Q9Y316 297 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 HDGFL3Q9Y3E1 203 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 V9GYQ6 96 aa11.53□□□□□ -0.56
TCOF1-210ENST00000506767 A0A1B0GUH1 482 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 A0A1W2PNR3 127 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 TCRBV3S1A0A5B6 114 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 CD8B2A6NJW9 211 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 CLCA1A8K7I4 914 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 FZD7O75084 574 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 PMS2P2O95744 297 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 UMPSP11172 480 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 IMPDH2P12268 514 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 RHCEP18577 417 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 FUT4P22083 530 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 SLC7A1P30825 629 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 YAP1P46937 504 aaKnown RBP11.52□□□□□ -0.57
TCOF1-210ENST00000506767 EIF1AXP47813 144 aaKnown RBP11.52□□□□□ -0.57
TCOF1-210ENST00000506767 CARD18P57730 90 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 ST3GAL3Q11203 375 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 MYBPHQ13203 477 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 ZSCAN26Q16670 478 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 C4orf17Q53FE4 359 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 C5orf46Q6UWT4 87 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 C3P1Q6ZMU1 363 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 NKAIN4Q8IVV8 208 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 ADGRG5Q8IZF4 528 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 OFCC1Q8IZS5 231 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 RPRMLQ8N4K4 120 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 MARVELD2Q8N4S9 558 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 OSTF1Q92882 214 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 OR5B2Q96R09 309 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 SEPHS2Q99611 448 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 TTYH2Q9BSA4 534 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 TMEM43Q9BTV4 400 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 MAN2C1Q9NTJ4 1040 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 SELENONQ9NZV5 590 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 TRAPPC4Q9Y296 219 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 PRRC2CQ9Y520 2896 aaKnown RBP11.52□□□□□ -0.57
TCOF1-210ENST00000506767 ARHGAP21Q5T5U3 1957 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 KIAA1549Q9HCM3 1950 aa11.52□□□□□ -0.57
TCOF1-210ENST00000506767 MBD3L4A6NDZ8 208 aaPredicted RBP11.51□□□□□ -0.57
TCOF1-210ENST00000506767 MBD3L3A6NE82 208 aaPredicted RBP11.51□□□□□ -0.57
TCOF1-210ENST00000506767 MBD3L5A6NJ08 208 aaPredicted RBP11.51□□□□□ -0.57
TCOF1-210ENST00000506767 hCG_2039718K7EN88 272 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 CCL21O00585 134 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 CXCL13O43927 109 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 FABP3P05413 133 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 TFPIP10646 304 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 ITGA2P17301 1181 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 TIMP3P35625 211 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 DIO1P49895 249 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 RAC3P60763 192 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 SGCBQ16585 318 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 C1orf140Q5VVS0 124 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 RPTNQ6XPR3 784 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 B3GNT6Q6ZMB0 384 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 CHMP1BQ7LBR1 199 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 ZDHHC21Q8IVQ6 265 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 PIK3C3Q8NEB9 887 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 MBD3L2Q8NHZ7 208 aaPredicted RBP11.51□□□□□ -0.57
TCOF1-210ENST00000506767 WNT2BQ93097 391 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 CPNE4Q96A23 557 aaPredicted RBP11.51□□□□□ -0.57
TCOF1-210ENST00000506767 KTI12Q96EK9 354 aaPredicted RBP11.51□□□□□ -0.57
TCOF1-210ENST00000506767 DHRS1Q96LJ7 313 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 TRIB1Q96RU8 372 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 PTDSS2Q9BVG9 487 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 SRXN1Q9BYN0 137 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 TIGARQ9NQ88 270 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 RHCGQ9UBD6 479 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 SH3BGRL2Q9UJC5 107 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 ZNF175Q9Y473 711 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 PHF3Q92576 2039 aaKnown RBP11.51□□□□□ -0.57
TCOF1-210ENST00000506767 POLEQ07864 2286 aa11.51□□□□□ -0.57
TCOF1-210ENST00000506767 ESPL1Q14674 2120 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 DHRS12A0PJE2 317 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 LIPT2A6NK58 231 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 FTCDNL1E5RQL4 147 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 SULT2B1O00204 365 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 LRRTM2O43300 516 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 DNPH1O43598 174 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 TOXO94900 526 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 DIRAS1O95057 198 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 TGM6O95932 706 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 GPIP06744 558 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 GLI4P10075 376 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 RAP2AP10114 183 aa11.5□□□□□ -0.57
TCOF1-210ENST00000506767 HOXB6P17509 224 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms