RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 RAB8BQ92930 207 aa13.97□□□□□ -0.17
DDR1-250ENST00000503628 KISS1RQ969F8 398 aaPredicted RBP13.97□□□□□ -0.17
DDR1-250ENST00000503628 AURKBQ96GD4 344 aaPredicted RBP13.97□□□□□ -0.17
DDR1-250ENST00000503628 SDF2Q99470 211 aa13.97□□□□□ -0.17
DDR1-250ENST00000503628 TMEM185BQ9H7F4 350 aa13.97□□□□□ -0.17
DDR1-250ENST00000503628 SLAMF8Q9P0V8 285 aa13.97□□□□□ -0.17
DDR1-250ENST00000503628 NDUFAF1Q9Y375 327 aa13.97□□□□□ -0.17
DDR1-250ENST00000503628 HMGN4O00479 90 aa13.96□□□□□ -0.17
DDR1-250ENST00000503628 SLC22A2O15244 555 aa13.96□□□□□ -0.17
DDR1-250ENST00000503628 NDUFB5O43674 189 aa13.96□□□□□ -0.17
DDR1-250ENST00000503628 OXSR1O95747 527 aaPredicted RBP13.96□□□□□ -0.17
DDR1-250ENST00000503628 SLC25A16P16260 332 aa13.96□□□□□ -0.17
DDR1-250ENST00000503628 PSMA4P25789 261 aaKnown RBP13.96□□□□□ -0.17
DDR1-250ENST00000503628 MVDP53602 400 aa13.96□□□□□ -0.17
DDR1-250ENST00000503628 CDH11P55287 796 aa13.96□□□□□ -0.17
DDR1-250ENST00000503628 CARD18P57730 90 aa13.96□□□□□ -0.17
DDR1-250ENST00000503628 MAPRE2Q15555 327 aa13.96□□□□□ -0.17
DDR1-250ENST00000503628 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.96□□□□□ -0.17
DDR1-250ENST00000503628 TUSC5Q8IXB3 177 aa13.96□□□□□ -0.17
DDR1-250ENST00000503628 MSRB3Q8IXL7 192 aa13.96□□□□□ -0.17
DDR1-250ENST00000503628 GTPBP8Q8N3Z3 284 aaPredicted RBP13.96□□□□□ -0.17
DDR1-250ENST00000503628 DPP10Q8N608 796 aa13.96□□□□□ -0.17
DDR1-250ENST00000503628 ZNF525Q8N782 197 aa13.96□□□□□ -0.17
DDR1-250ENST00000503628 POTEKPQ9BYX7 375 aa13.96□□□□□ -0.17
DDR1-250ENST00000503628 UBQLN4Q9NRR5 601 aa13.96□□□□□ -0.17
DDR1-250ENST00000503628 SLC25A37Q9NYZ2 338 aa13.96□□□□□ -0.17
DDR1-250ENST00000503628 VAPAQ9P0L0 249 aa13.96□□□□□ -0.17
DDR1-250ENST00000503628 CAPN7Q9Y6W3 813 aa13.96□□□□□ -0.17
DDR1-250ENST00000503628 PLCE1Q9P212 2302 aa13.96□□□□□ -0.18
DDR1-250ENST00000503628 A0A087WZY1 265 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 TRBV5-3A0A0A0MS03 114 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 ALG1L2C9J202 215 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 CLIC1O00299 241 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 STX11O75558 287 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 HPGDP15428 266 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 PPIBP23284 216 aaKnown RBP13.95□□□□□ -0.18
DDR1-250ENST00000503628 IGFBP5P24593 272 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 CRATP43155 626 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 FUT5Q11128 374 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 ITGADQ13349 1161 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 P2RY6Q15077 328 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 RAB35Q15286 201 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 PDSS1Q5T2R2 415 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 C11orf71Q6IPW1 123 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 DLEU7Q6UYE1 221 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 BHLHA15Q7RTS1 189 aaPredicted RBP13.95□□□□□ -0.18
DDR1-250ENST00000503628 DHDDSQ86SQ9 333 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 MTDHQ86UE4 582 aaKnown RBP13.95□□□□□ -0.18
DDR1-250ENST00000503628 RETREG3Q86VR2 466 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 RNF128Q8TEB7 428 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 FAM168AQ92567 244 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 ROPN1LQ96C74 230 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 RNF145Q96MT1 663 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 USB1Q9BQ65 265 aaKnown RBP13.95□□□□□ -0.18
DDR1-250ENST00000503628 ZNF350Q9GZX5 532 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 HOXD1Q9GZZ0 328 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 RAD21L1Q9H4I0 556 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 POLE3Q9NRF9 147 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 ARMCX1Q9P291 453 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 GMEB1Q9Y692 573 aa13.95□□□□□ -0.18
DDR1-250ENST00000503628 NPIPA5A0A0B4J1W7 369 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 A0A1W2PQD3 144 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 PRAMEF27A3QJZ7 478 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 SLC35F4A4IF30 521 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 BBIP1A8MTZ0 92 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 ZNF814B7Z6K7 855 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 NPIPA7E9PJI5 369 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 FBP2O00757 339 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 SCDO00767 359 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 ABCD4O14678 606 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 GUSBP08236 651 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 PABPC4LP0CB38 370 aaKnown RBP13.94□□□□□ -0.18
DDR1-250ENST00000503628 NPIPA8P0DM63 369 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 ETFAP13804 333 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 ME2P23368 584 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 ATP12AP54707 1039 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 LSM11P83369 360 aaKnown RBP eCLIP13.94□□□□□ -0.18
DDR1-250ENST00000503628 RGNQ15493 299 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 STK11Q15831 433 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 ZNF239Q16600 458 aaKnown RBP13.94□□□□□ -0.18
DDR1-250ENST00000503628 PLPPR5Q32ZL2 321 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 FAM120AOSQ5T036 256 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 PIGWQ7Z7B1 504 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 SNX32Q86XE0 403 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 ZNF527Q8NB42 609 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 ZBTB8AQ96BR9 441 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 REXO5Q96IC2 774 aaKnown RBP13.94□□□□□ -0.18
DDR1-250ENST00000503628 CHODLQ9H9P2 273 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 MED17Q9NVC6 651 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 THUMPD1Q9NXG2 353 aaKnown RBP13.94□□□□□ -0.18
DDR1-250ENST00000503628 KLHL13Q9P2N7 655 aa13.94□□□□□ -0.18
DDR1-250ENST00000503628 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.94□□□□□ -0.18
DDR1-250ENST00000503628 C7orf72A4D263 438 aa13.93□□□□□ -0.18
DDR1-250ENST00000503628 E7EQL1 145 aa13.93□□□□□ -0.18
DDR1-250ENST00000503628 NPIPB9F8W1W9 429 aa13.93□□□□□ -0.18
DDR1-250ENST00000503628 FCMRO60667 390 aa13.93□□□□□ -0.18
DDR1-250ENST00000503628 SHOX2O60902 331 aaPredicted RBP13.93□□□□□ -0.18
DDR1-250ENST00000503628 LYZL6O75951 148 aa13.93□□□□□ -0.18
DDR1-250ENST00000503628 USF1P22415 310 aaPredicted RBP13.93□□□□□ -0.18
DDR1-250ENST00000503628 SHC1P29353 583 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms