RNA–Protein interactions for RNA: ENST00000498530.5

PMPCB-208, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-208ENST00000498530 XCR1P46094 333 aa4.82□□□□□ -1.64
PMPCB-208ENST00000498530 CDKN1BP46527 198 aa4.82□□□□□ -1.64
PMPCB-208ENST00000498530 STARP49675 285 aa4.82□□□□□ -1.64
PMPCB-208ENST00000498530 CLDN8P56748 225 aa4.82□□□□□ -1.64
PMPCB-208ENST00000498530 VGLL4Q14135 290 aa4.82□□□□□ -1.64
PMPCB-208ENST00000498530 KCNJ11Q14654 390 aa4.82□□□□□ -1.64
PMPCB-208ENST00000498530 CNPY1Q3B7I2 92 aa4.82□□□□□ -1.64
PMPCB-208ENST00000498530 GLYR1Q49A26 553 aaPredicted RBP4.82□□□□□ -1.64
PMPCB-208ENST00000498530 TMEM220Q6QAJ8 160 aa4.82□□□□□ -1.64
PMPCB-208ENST00000498530 MFSD6LQ8IWD5 586 aa4.82□□□□□ -1.64
PMPCB-208ENST00000498530 ZNF321PQ8N8H1 164 aa4.82□□□□□ -1.64
PMPCB-208ENST00000498530 C4orf32Q8N8J7 132 aa4.82□□□□□ -1.64
PMPCB-208ENST00000498530 ART5Q96L15 291 aa4.82□□□□□ -1.64
PMPCB-208ENST00000498530 TECTBQ96PL2 329 aa4.82□□□□□ -1.64
PMPCB-208ENST00000498530 CNN2Q99439 309 aaKnown RBP4.82□□□□□ -1.64
PMPCB-208ENST00000498530 MAPKAP1Q9BPZ7 522 aa4.82□□□□□ -1.64
PMPCB-208ENST00000498530 CHCHD5Q9BSY4 110 aa4.82□□□□□ -1.64
PMPCB-208ENST00000498530 IQCGQ9H095 443 aaKnown RBP4.82□□□□□ -1.64
PMPCB-208ENST00000498530 JPT2Q9H910 190 aa4.82□□□□□ -1.64
PMPCB-208ENST00000498530 ANKRA2Q9H9E1 313 aa4.82□□□□□ -1.64
PMPCB-208ENST00000498530 IMPAD1Q9NX62 359 aa4.82□□□□□ -1.64
PMPCB-208ENST00000498530 PEF1Q9UBV8 284 aaKnown RBP4.82□□□□□ -1.64
PMPCB-208ENST00000498530 ASIC3Q9UHC3 531 aa4.82□□□□□ -1.64
PMPCB-208ENST00000498530 RIMS3Q9UJD0 308 aa4.82□□□□□ -1.64
PMPCB-208ENST00000498530 PCNTO95613 3336 aa4.82□□□□□ -1.64
PMPCB-208ENST00000498530 CPS1P31327 1500 aa4.82□□□□□ -1.64
PMPCB-208ENST00000498530 ERICH3Q5RHP9 1530 aa4.82□□□□□ -1.64
PMPCB-208ENST00000498530 IDSB3KWA1 339 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 E7ESA3 106 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 RGS16O15492 202 aaPredicted RBP4.81□□□□□ -1.64
PMPCB-208ENST00000498530 EDIL3O43854 480 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 ZNF432O94892 652 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 H6PDO95479 791 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 TRIM49P0CI25 452 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 TRIM49CP0CI26 452 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 ZNF43P17038 809 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 POLR2EP19388 210 aaKnown RBP4.81□□□□□ -1.64
PMPCB-208ENST00000498530 BCL3P20749 454 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 LEPP41159 167 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 TNNT2P45379 298 aaPredicted RBP4.81□□□□□ -1.64
PMPCB-208ENST00000498530 ACLYP53396 1101 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 RPS14P62263 151 aaKnown RBP4.81□□□□□ -1.64
PMPCB-208ENST00000498530 ASPHQ12797 758 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 CUL1Q13616 776 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 CHRNA6Q15825 494 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 KLHL40Q2TBA0 621 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 TRIM16LQ309B1 348 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 ALKBH6Q3KRA9 238 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 DMRTC1Q5HYR2 192 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 ZNF506Q5JVG8 444 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 EIF3MQ7L2H7 374 aaKnown RBP4.81□□□□□ -1.64
PMPCB-208ENST00000498530 SVOPLQ8N434 492 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 CSNK1A1LQ8N752 337 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 HCAR2Q8TDS4 363 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 TCTEX1D2Q8WW35 142 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 HTR3CQ8WXA8 447 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 ARNTL2Q8WYA1 636 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 CXorf40BQ96DE9 158 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 PLEKHA8Q96JA3 519 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 ZNF578Q96N58 590 aaPredicted RBP4.81□□□□□ -1.64
PMPCB-208ENST00000498530 CYP2S1Q96SQ9 504 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 MBOAT4Q96T53 435 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 FMO2Q99518 471 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 TDRD3Q9H7E2 651 aaKnown RBP4.81□□□□□ -1.64
PMPCB-208ENST00000498530 SUDS3Q9H7L9 328 aaPredicted RBP4.81□□□□□ -1.64
PMPCB-208ENST00000498530 WARS2Q9UGM6 360 aaKnown RBP4.81□□□□□ -1.64
PMPCB-208ENST00000498530 ABCA8O94911 1581 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 ZFYVE16Q7Z3T8 1539 aa4.81□□□□□ -1.64
PMPCB-208ENST00000498530 GON4LQ3T8J9 2241 aa4.8□□□□□ -1.64
PMPCB-208ENST00000498530 COL16A1Q07092 1604 aaPredicted RBP4.8□□□□□ -1.64
PMPCB-208ENST00000498530 TRAV25A0A0B4J276 109 aa4.8□□□□□ -1.64
PMPCB-208ENST00000498530 SMCO3A2RU48 225 aa4.8□□□□□ -1.64
PMPCB-208ENST00000498530 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.8□□□□□ -1.64
PMPCB-208ENST00000498530 ZNF487B1APH4 448 aa4.8□□□□□ -1.64
PMPCB-208ENST00000498530 EPM2AB3EWF7 344 aa4.8□□□□□ -1.64
PMPCB-208ENST00000498530 K7ENP7 123 aa4.8□□□□□ -1.64
PMPCB-208ENST00000498530 FCN1O00602 326 aa4.8□□□□□ -1.64
PMPCB-208ENST00000498530 MELTFP08582 738 aa4.8□□□□□ -1.64
PMPCB-208ENST00000498530 RNH1P13489 461 aaKnown RBP4.8□□□□□ -1.64
PMPCB-208ENST00000498530 CPN2P22792 545 aa4.8□□□□□ -1.64
PMPCB-208ENST00000498530 NAMPTP43490 491 aa4.8□□□□□ -1.64
PMPCB-208ENST00000498530 DOC2AQ14183 400 aa4.8□□□□□ -1.64
PMPCB-208ENST00000498530 GRB7Q14451 532 aa4.8□□□□□ -1.64
PMPCB-208ENST00000498530 DGUOKQ16854 277 aa4.8□□□□□ -1.64
PMPCB-208ENST00000498530 EIPR1Q53HC9 387 aa4.8□□□□□ -1.64
PMPCB-208ENST00000498530 PIP5KL1Q5T9C9 394 aa4.8□□□□□ -1.64
PMPCB-208ENST00000498530 ATP6V0D2Q8N8Y2 350 aa4.8□□□□□ -1.64
PMPCB-208ENST00000498530 OR4F6Q8NGB9 312 aa4.8□□□□□ -1.64
PMPCB-208ENST00000498530 FAM110BQ8TC76 370 aa4.8□□□□□ -1.64
PMPCB-208ENST00000498530 ANKRD49Q8WVL7 239 aa4.8□□□□□ -1.64
PMPCB-208ENST00000498530 ZNF641Q96N77 438 aaPredicted RBP4.8□□□□□ -1.64
PMPCB-208ENST00000498530 RNF2Q99496 336 aa4.8□□□□□ -1.64
PMPCB-208ENST00000498530 RBM4BQ9BQ04 359 aaKnown RBP4.8□□□□□ -1.64
PMPCB-208ENST00000498530 ZBP1Q9H171 429 aa4.8□□□□□ -1.64
PMPCB-208ENST00000498530 MRPS30Q9NP92 439 aaKnown RBP4.8□□□□□ -1.64
PMPCB-208ENST00000498530 NANSQ9NR45 359 aa4.8□□□□□ -1.64
PMPCB-208ENST00000498530 CUTCQ9NTM9 273 aa4.8□□□□□ -1.64
PMPCB-208ENST00000498530 SPRR3Q9UBC9 169 aa4.8□□□□□ -1.64
PMPCB-208ENST00000498530 SLC2A6Q9UGQ3 507 aa4.8□□□□□ -1.64
PMPCB-208ENST00000498530 VANGL2Q9ULK5 521 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms