RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 NCBP2P52298 156 aaKnown RBP eCLIP12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 TMEM44Q2T9K0 475 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 PRRT3Q5FWE3 981 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 LIN54Q6MZP7 749 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 FAM98AQ8NCA5 519 aaKnown RBP12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 OR6K3Q8NGY3 331 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 OR51A7Q8NH64 312 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 HAVCR2Q8TDQ0 301 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 S100A16Q96FQ6 103 aaKnown RBP12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 LCORQ96JN0 433 aaPredicted RBP12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 PFDN5Q99471 154 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 MCHR1Q99705 422 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 OR52D1Q9H346 318 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 IL21RQ9HBE5 538 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 NOX4Q9NPH5 578 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 MEPEQ9NQ76 525 aaPredicted RBP12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 ZMIZ1Q9ULJ6 1067 aa12.1□□□□□ -0.47
GAPVD1-220ENST00000497580 HELZP42694 1942 aaKnown RBP12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 TRBV2A0A0J9YWF9 115 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 OR2T1O43869 369 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 ARL6IP5O75915 188 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 TMIGD3P0DMS9 266 aaPredicted RBP12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 CDK2P24941 298 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 OMPP47874 163 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 P2RX1P51575 399 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 ZNF234Q14588 700 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 OR7A5Q15622 319 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 CLLU1OSQ5K130 101 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 ZNF620Q6ZNG0 422 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 ZMYND19Q96E35 227 aaPredicted RBP12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 GPR174Q9BXC1 333 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 NEUROD4Q9HD90 331 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 FAM96BQ9Y3D0 163 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 FEZF1A0PJY2 475 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 NAP1L6A6NFF2 107 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 AGPAT2O15120 278 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 NDUFB6O95139 128 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 HTR3BO95264 441 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 NPPBP16860 134 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 CDKN3Q16667 212 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 FAM122BQ7Z309 247 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 NR4A3Q92570 626 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 ARL5BQ96KC2 179 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 EFCAB11Q9BUY7 163 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 SLC38A1Q9H2H9 487 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 COMMD9Q9P000 198 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 METTL21EPA6NDL7 271 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 PPM1DO15297 605 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 FGBP02675 491 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 GTF2F2P13984 249 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 HTR2AP28223 471 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 CALCRP30988 508 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 ZNF157P51786 506 aaPredicted RBP12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 FAM83HQ6ZRV2 1179 aaPredicted RBP12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 GID4Q8IVV7 300 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 OR51S1Q8NGJ8 323 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 SNX33Q8WV41 574 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 RSRP1Q9BUV0 290 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 PIGMQ9H3S5 423 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 KLHL31Q9H511 634 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 SIRT3Q9NTG7 399 aaPredicted RBP12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 C2orf42Q9NWW7 574 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 PLEKHA6Q9Y2H5 1048 aa12.09□□□□□ -0.47
GAPVD1-220ENST00000497580 ALPK2Q86TB3 2170 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 PLPP2O43688 288 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 CKMP06732 381 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 PPIAP62937 165 aaKnown RBP12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 DPPA4Q7L190 304 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 DOK4Q8TEW6 326 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 NKX3-1Q99801 234 aaPredicted RBP12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 SLC7A7Q9UM01 511 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 DOCK6Q96HP0 2047 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 PLPP1O14494 284 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 OAZ2O95190 189 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 HMGN2P05204 90 aaKnown RBP12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 DLSTP36957 453 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 GUCA2AQ02747 115 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 FABP9Q0Z7S8 132 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 TGIF1Q15583 401 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 TSC22D1Q15714 1073 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 ODF4Q2M2E3 257 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 PLEKHN1Q494U1 663 aaPredicted RBP12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 TMEM220Q6QAJ8 160 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 ZNF467Q7Z7K2 595 aaPredicted RBP12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 CACUL1Q86Y37 369 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 CAMKVQ8NCB2 501 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 TMIEQ8NEW7 156 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 OR4C16Q8NGL9 310 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 C14orf79Q96F83 325 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 PGLYRP3Q96LB9 341 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 TIMP4Q99727 224 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 MICU1Q9BPX6 476 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 RIOK2Q9BVS4 552 aaKnown RBP12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 SLITRK2Q9H156 845 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 SNRPGP15A8MWD9 76 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 C1orf196B1AJZ1 125 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 GSTZ1O43708 216 aaPredicted RBP12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 MGMTP16455 207 aa12.08□□□□□ -0.48
GAPVD1-220ENST00000497580 NR0B1P51843 470 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms