RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 INAQ16352 499 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 HLA-BQ31612 363 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 PLK5Q496M5 336 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 KLHL12Q53G59 568 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 RNFT1Q5M7Z0 435 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 SLC35D3Q5M8T2 416 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 SPANXN2Q5MJ10 180 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 PHF19Q5T6S3 580 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 C1orf189Q5VU69 101 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 NIPAL3Q6P499 406 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 GUSBP11Q6P575 273 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 MEPCEQ7L2J0 689 aaKnown RBP6.35□□□□□ -1.39
USP39-219ENST00000496047 NUP54Q7Z3B4 507 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 NANOGNBQ7Z5D8 188 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 ACBD7Q8N6N7 88 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 POMGNT2Q8NAT1 580 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 OR5L2Q8NGL0 311 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 OR6Q1Q8NGQ2 317 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 OR1N1Q8NGS0 311 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 OR13C2Q8NGS9 318 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 OR4Q3Q8NH05 313 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 FNDC8Q8TC99 324 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 SAP25Q8TEE9 199 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 ZNF721Q8TF20 911 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 PTPMT1Q8WUK0 201 aaPredicted RBP6.35□□□□□ -1.39
USP39-219ENST00000496047 TMEM234Q8WY98 164 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 TSLPQ969D9 159 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 TP53INP1Q96A56 240 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 PPP1R14BQ96C90 147 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 TMCO6Q96DC7 493 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 ZNF837Q96EG3 531 aaPredicted RBP6.35□□□□□ -1.39
USP39-219ENST00000496047 SH3YL1Q96HL8 342 aaPredicted RBP6.35□□□□□ -1.39
USP39-219ENST00000496047 CCDC74BQ96LY2 380 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 KCTD7Q96MP8 289 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 OPALINQ96PE5 141 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 OR5M11Q96RB7 305 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 OR6C1Q96RD1 312 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 SECISBP2Q96T21 854 aaKnown RBP6.35□□□□□ -1.39
USP39-219ENST00000496047 LPAR4Q99677 370 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 GPA33Q99795 319 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 TAPBPLQ9BX59 468 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 RSPO3Q9BXY4 272 aaPredicted RBP6.35□□□□□ -1.39
USP39-219ENST00000496047 WWTR1Q9GZV5 400 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 NXF5Q9H1B4 397 aaKnown RBP6.35□□□□□ -1.39
USP39-219ENST00000496047 TBCCD1Q9NVR7 557 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 FBXO34Q9NWN3 711 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 KCNE5Q9UJ90 142 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 FBXO4Q9UKT5 387 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 ICAM5Q9UMF0 924 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 SLC6A14Q9UN76 642 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 SIGLEC7Q9Y286 467 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 EXOGQ9Y2C4 368 aaKnown RBP6.35□□□□□ -1.39
USP39-219ENST00000496047 DTX4Q9Y2E6 619 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 GPR52Q9Y2T5 361 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 LSM2Q9Y333 95 aaKnown RBP6.35□□□□□ -1.39
USP39-219ENST00000496047 SDK1Q7Z5N4 2213 aa6.35□□□□□ -1.39
USP39-219ENST00000496047 CFAP47Q6ZTR5 3102 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 A0A075B6Q4 140 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 TRAV27A0A087WT01 109 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 ISPDA4D126 451 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 ZNF670-ZNF695F2Z2N8 137 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 H3BMH7 237 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 BHLHE40O14503 412 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 CDC42EP2O14613 210 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 EFSO43281 561 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 HCRTR2O43614 444 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 SIGLEC6O43699 453 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 PFDN1O60925 122 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 TRIM3O75382 744 aaPredicted RBP6.34□□□□□ -1.39
USP39-219ENST00000496047 DDAH2O95865 285 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 RENP00797 406 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 SERPINA3P01011 423 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 IL1AP01583 271 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 MT-ND5P03915 603 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 THY1P04216 161 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 IGKV3-11P04433 115 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 KLK3P07288 261 aaPredicted RBP6.34□□□□□ -1.39
USP39-219ENST00000496047 OCM2P0CE71 109 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 OCMP0CE72 109 aaPredicted RBP6.34□□□□□ -1.39
USP39-219ENST00000496047 PEPDP12955 493 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 MAKP20794 623 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 FUT4P22083 530 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 GALP22466 123 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 MYL9P24844 172 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 GTF2E2P29084 291 aaKnown RBP6.34□□□□□ -1.39
USP39-219ENST00000496047 OPRL1P41146 370 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 SOX3P41225 446 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 ACAA2P42765 397 aaKnown RBP6.34□□□□□ -1.39
USP39-219ENST00000496047 HTR3AP46098 478 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 P2RX1P51575 399 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 SUMO3P55854 103 aaPredicted RBP6.34□□□□□ -1.39
USP39-219ENST00000496047 SLC26A5P58743 744 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 CCL7P80098 99 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 EFNB1P98172 346 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 HSF2Q03933 536 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 ACSM1Q08AH1 577 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 TCF15Q12870 199 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 GPR50Q13585 617 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 ISXQ2M1V0 245 aa6.34□□□□□ -1.39
USP39-219ENST00000496047 ZNF181Q2M3W8 571 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms