RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 TRPV4Q9HBA0 871 aa11.98□□□□□ -0.49
PTPN7-217ENST00000495688 ACTR10Q9NZ32 417 aa11.98□□□□□ -0.49
PTPN7-217ENST00000495688 GDE1Q9NZC3 331 aa11.98□□□□□ -0.49
PTPN7-217ENST00000495688 GNG8Q9UK08 70 aa11.98□□□□□ -0.49
PTPN7-217ENST00000495688 ING4Q9UNL4 249 aa11.98□□□□□ -0.49
PTPN7-217ENST00000495688 OR2W5A6NFC9 320 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 C4orf47A7E2U8 309 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 LEUTXA8MZ59 168 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 FLRT2O43155 660 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 FMO6PO60774 539 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 SERPINI2O75830 405 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 UBL3O95164 117 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 CBX7O95931 251 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 GRPRP30550 384 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 MMP15P51511 669 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 PSG6Q00889 435 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 CDK5R1Q15078 307 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 TRAM1Q15629 374 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 ZNF613Q6PF04 617 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 PARM1Q6UWI2 310 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 MS4A15Q8N5U1 240 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 FRMD1Q8N878 549 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 SLC22A18Q96BI1 424 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 SMIM19Q96E16 107 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 STACQ99469 402 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 ZFYVE21Q9BQ24 234 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 GPR174Q9BXC1 333 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 SLC25A18Q9H1K4 315 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 HAO2Q9NYQ3 351 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 ZNF346Q9UL40 294 aaKnown RBP11.97□□□□□ -0.49
PTPN7-217ENST00000495688 COPS3Q9UNS2 423 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 FLVCR2Q9UPI3 526 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 DTX4Q9Y2E6 619 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 IER3IP1Q9Y5U9 82 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 NPFFR2Q9Y5X5 522 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 NUBP2Q9Y5Y2 271 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 EML5Q05BV3 1969 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 A0A087WV62 115 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 TRBV2A0A0J9YWF9 115 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 TRABD2BA6NFA1 517 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 FAM171A2A8MVW0 826 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 SELENOFO60613 162 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 TOXO94900 526 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 PER3P56645 1201 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 KIR2DS3Q14952 304 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 GSG1Q2KHT4 349 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 TMEM255AQ5JRV8 349 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 STPG1Q5TH74 334 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 SFRP4Q6FHJ7 346 aaPredicted RBP11.97□□□□□ -0.49
PTPN7-217ENST00000495688 KIRREL2Q6UWL6 708 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 SERPINA12Q8IW75 414 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 CAMKVQ8NCB2 501 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 ZNF671Q8TAW3 534 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 NMNAT3Q96T66 252 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 C1QTNF7Q9BXJ2 289 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 UCKL1Q9NWZ5 548 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 DNAJB12Q9NXW2 375 aaKnown RBP11.97□□□□□ -0.49
PTPN7-217ENST00000495688 STMN3Q9NZ72 180 aa11.97□□□□□ -0.49
PTPN7-217ENST00000495688 URADA6NGE7 173 aa11.96□□□□□ -0.49
PTPN7-217ENST00000495688 ACOD1A6NK06 481 aa11.96□□□□□ -0.49
PTPN7-217ENST00000495688 TNFSF14O43557 240 aa11.96□□□□□ -0.49
PTPN7-217ENST00000495688 PRKNO60260 465 aaPredicted RBP11.96□□□□□ -0.49
PTPN7-217ENST00000495688 GMDSO60547 372 aa11.96□□□□□ -0.49
PTPN7-217ENST00000495688 ICMTO60725 284 aa11.96□□□□□ -0.49
PTPN7-217ENST00000495688 HPXP02790 462 aa11.96□□□□□ -0.49
PTPN7-217ENST00000495688 PTHLHP12272 177 aa11.96□□□□□ -0.49
PTPN7-217ENST00000495688 ANXA3P12429 323 aa11.96□□□□□ -0.49
PTPN7-217ENST00000495688 SLC6A6P31641 620 aa11.96□□□□□ -0.49
PTPN7-217ENST00000495688 CLDN12P56749 244 aa11.96□□□□□ -0.49
PTPN7-217ENST00000495688 SIRPAP78324 504 aa11.96□□□□□ -0.49
PTPN7-217ENST00000495688 SNTB2Q13425 540 aaKnown RBP11.96□□□□□ -0.49
PTPN7-217ENST00000495688 DEFB110Q30KQ9 67 aa11.96□□□□□ -0.49
PTPN7-217ENST00000495688 HES5Q5TA89 166 aa11.96□□□□□ -0.49
PTPN7-217ENST00000495688 TEX261Q6UWH6 196 aa11.96□□□□□ -0.49
PTPN7-217ENST00000495688 OR8H3Q8N146 312 aa11.96□□□□□ -0.49
PTPN7-217ENST00000495688 SNX33Q8WV41 574 aa11.96□□□□□ -0.49
PTPN7-217ENST00000495688 RERGQ96A58 199 aaPredicted RBP11.96□□□□□ -0.49
PTPN7-217ENST00000495688 BMFQ96LC9 184 aa11.96□□□□□ -0.49
PTPN7-217ENST00000495688 GPR137Q96N19 417 aa11.96□□□□□ -0.49
PTPN7-217ENST00000495688 ZNF426Q9BUY5 554 aa11.96□□□□□ -0.49
PTPN7-217ENST00000495688 SFXN1Q9H9B4 322 aa11.96□□□□□ -0.49
PTPN7-217ENST00000495688 C2orf42Q9NWW7 574 aa11.96□□□□□ -0.49
PTPN7-217ENST00000495688 ANKRD10Q9NXR5 420 aa11.96□□□□□ -0.49
PTPN7-217ENST00000495688 CHRNA9Q9UGM1 479 aa11.96□□□□□ -0.49
PTPN7-217ENST00000495688 U3KQ87 197 aa11.96□□□□□ -0.49
PTPN7-217ENST00000495688 TICRRQ7Z2Z1 1910 aa11.96□□□□□ -0.49
PTPN7-217ENST00000495688 A6NCN8 305 aa11.96□□□□□ -0.5
PTPN7-217ENST00000495688 OGG1O15527 345 aa11.96□□□□□ -0.5
PTPN7-217ENST00000495688 RDH16O75452 317 aa11.96□□□□□ -0.5
PTPN7-217ENST00000495688 CDC123O75794 336 aaPredicted RBP11.96□□□□□ -0.5
PTPN7-217ENST00000495688 CRYZL1O95825 349 aa11.96□□□□□ -0.5
PTPN7-217ENST00000495688 ENPP1P22413 925 aa11.96□□□□□ -0.5
PTPN7-217ENST00000495688 VSX2P58304 361 aaPredicted RBP11.96□□□□□ -0.5
PTPN7-217ENST00000495688 ACTC1P68032 377 aa11.96□□□□□ -0.5
PTPN7-217ENST00000495688 ACTA1P68133 377 aa11.96□□□□□ -0.5
PTPN7-217ENST00000495688 ZSWIM7Q19AV6 140 aa11.96□□□□□ -0.5
PTPN7-217ENST00000495688 UBE2Q1Q7Z7E8 422 aa11.96□□□□□ -0.5
PTPN7-217ENST00000495688 CMTM4Q8IZR5 234 aa11.96□□□□□ -0.5
PTPN7-217ENST00000495688 ZNF680Q8NEM1 530 aa11.96□□□□□ -0.5
PTPN7-217ENST00000495688 PIGKQ92643 395 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms