RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 SHC1P29353 583 aa15.36■□□□□ 0.05
HDAC6-235ENST00000495515 TIMP3P35625 211 aa15.36■□□□□ 0.05
HDAC6-235ENST00000495515 CDH12P55289 794 aa15.36■□□□□ 0.05
HDAC6-235ENST00000495515 RAC3P60763 192 aa15.36■□□□□ 0.05
HDAC6-235ENST00000495515 PMPCAQ10713 525 aa15.36■□□□□ 0.05
HDAC6-235ENST00000495515 OR2A2Q6IF42 318 aa15.36■□□□□ 0.05
HDAC6-235ENST00000495515 PPP4R4Q6NUP7 873 aa15.36■□□□□ 0.05
HDAC6-235ENST00000495515 PGM2L1Q6PCE3 622 aa15.36■□□□□ 0.05
HDAC6-235ENST00000495515 CYP2R1Q6VVX0 501 aa15.36■□□□□ 0.05
HDAC6-235ENST00000495515 ADGRE4PQ86SQ3 457 aa15.36■□□□□ 0.05
HDAC6-235ENST00000495515 FAM26EQ8N5C1 309 aa15.36■□□□□ 0.05
HDAC6-235ENST00000495515 MPP4Q96JB8 637 aa15.36■□□□□ 0.05
HDAC6-235ENST00000495515 ZFP3Q96NJ6 502 aa15.36■□□□□ 0.05
HDAC6-235ENST00000495515 CADM1Q9BY67 442 aaKnown RBP15.36■□□□□ 0.05
HDAC6-235ENST00000495515 ERRFI1Q9UJM3 462 aaPredicted RBP15.36■□□□□ 0.05
HDAC6-235ENST00000495515 TRAPPC4Q9Y296 219 aa15.36■□□□□ 0.05
HDAC6-235ENST00000495515 FAM32AQ9Y421 112 aaKnown RBP15.36■□□□□ 0.05
HDAC6-235ENST00000495515 TENM4Q6N022 2769 aa15.36■□□□□ 0.05
HDAC6-235ENST00000495515 HEATR5AQ86XA9 2040 aa15.36■□□□□ 0.05
HDAC6-235ENST00000495515 FREM3P0C091 2139 aa15.35■□□□□ 0.05
HDAC6-235ENST00000495515 PCNX3Q9H6A9 2034 aa15.35■□□□□ 0.05
HDAC6-235ENST00000495515 A0A087WUJ7 227 aa15.35■□□□□ 0.05
HDAC6-235ENST00000495515 A0A1W2PNR3 127 aa15.35■□□□□ 0.05
HDAC6-235ENST00000495515 MBD3L4A6NDZ8 208 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-235ENST00000495515 MBD3L3A6NE82 208 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-235ENST00000495515 MBD3L5A6NJ08 208 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-235ENST00000495515 DNPH1O43598 174 aa15.35■□□□□ 0.05
HDAC6-235ENST00000495515 AHSA1O95433 338 aa15.35■□□□□ 0.05
HDAC6-235ENST00000495515 PMS2P2O95744 297 aa15.35■□□□□ 0.05
HDAC6-235ENST00000495515 ITGA2P17301 1181 aa15.35■□□□□ 0.05
HDAC6-235ENST00000495515 IDUAP35475 653 aa15.35■□□□□ 0.05
HDAC6-235ENST00000495515 DIO1P49895 249 aa15.35■□□□□ 0.05
HDAC6-235ENST00000495515 GABPB1Q06547 395 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-235ENST00000495515 MYBPHQ13203 477 aa15.35■□□□□ 0.05
HDAC6-235ENST00000495515 PON3Q15166 354 aa15.35■□□□□ 0.05
HDAC6-235ENST00000495515 RIPPLY2Q5TAB7 128 aa15.35■□□□□ 0.05
HDAC6-235ENST00000495515 GTF2IRD2BQ6EKJ0 949 aa15.35■□□□□ 0.05
HDAC6-235ENST00000495515 GTF2IRD2Q86UP8 949 aa15.35■□□□□ 0.05
HDAC6-235ENST00000495515 MBD3L2Q8NHZ7 208 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-235ENST00000495515 SLC41A3Q96GZ6 507 aa15.35■□□□□ 0.05
HDAC6-235ENST00000495515 CCDC120Q96HB5 630 aa15.35■□□□□ 0.05
HDAC6-235ENST00000495515 ZNF845Q96IR2 970 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-235ENST00000495515 PRRC1Q96M27 445 aa15.35■□□□□ 0.05
HDAC6-235ENST00000495515 EPYCQ99645 322 aa15.35■□□□□ 0.05
HDAC6-235ENST00000495515 AMBRA1Q9C0C7 1298 aa15.35■□□□□ 0.05
HDAC6-235ENST00000495515 OR11A1Q9GZK7 315 aa15.35■□□□□ 0.05
HDAC6-235ENST00000495515 COQ10BQ9H8M1 238 aa15.35■□□□□ 0.05
HDAC6-235ENST00000495515 COQ3Q9NZJ6 369 aa15.35■□□□□ 0.05
HDAC6-235ENST00000495515 CLCF1Q9UBD9 225 aa15.35■□□□□ 0.05
HDAC6-235ENST00000495515 GTF3C1Q12789 2109 aa15.34■□□□□ 0.05
HDAC6-235ENST00000495515 HSPB2A8KAH6 182 aa15.34■□□□□ 0.05
HDAC6-235ENST00000495515 OR2T1O43869 369 aa15.34■□□□□ 0.05
HDAC6-235ENST00000495515 ATP6V1B2P21281 511 aa15.34■□□□□ 0.05
HDAC6-235ENST00000495515 NUP107P57740 925 aa15.34■□□□□ 0.05
HDAC6-235ENST00000495515 SLC35A1P78382 337 aa15.34■□□□□ 0.05
HDAC6-235ENST00000495515 MS4A2Q01362 244 aa15.34■□□□□ 0.05
HDAC6-235ENST00000495515 ST3GAL3Q11203 375 aa15.34■□□□□ 0.05
HDAC6-235ENST00000495515 HSPB2Q16082 182 aa15.34■□□□□ 0.05
HDAC6-235ENST00000495515 C1orf140Q5VVS0 124 aa15.34■□□□□ 0.05
HDAC6-235ENST00000495515 RPRMLQ8N4K4 120 aa15.34■□□□□ 0.05
HDAC6-235ENST00000495515 ARL5BQ96KC2 179 aa15.34■□□□□ 0.05
HDAC6-235ENST00000495515 FNDC11Q9BVV2 318 aa15.34■□□□□ 0.05
HDAC6-235ENST00000495515 TAPBPLQ9BX59 468 aa15.34■□□□□ 0.05
HDAC6-235ENST00000495515 RIMS3Q9UJD0 308 aa15.34■□□□□ 0.05
HDAC6-235ENST00000495515 SLC7A7Q9UM01 511 aa15.34■□□□□ 0.05
HDAC6-235ENST00000495515 ENPP4Q9Y6X5 453 aa15.34■□□□□ 0.05
HDAC6-235ENST00000495515 V9GYQ6 96 aa15.34■□□□□ 0.05
HDAC6-235ENST00000495515 AQP12BA6NM10 295 aa15.33■□□□□ 0.04
HDAC6-235ENST00000495515 EIF1BO60739 113 aaKnown RBP15.33■□□□□ 0.04
HDAC6-235ENST00000495515 SEMA7AO75326 666 aa15.33■□□□□ 0.04
HDAC6-235ENST00000495515 GPIP06744 558 aa15.33■□□□□ 0.04
HDAC6-235ENST00000495515 HOXB6P17509 224 aaKnown RBP15.33■□□□□ 0.04
HDAC6-235ENST00000495515 ENPP1P22413 925 aa15.33■□□□□ 0.04
HDAC6-235ENST00000495515 OR2B6P58173 313 aa15.33■□□□□ 0.04
HDAC6-235ENST00000495515 PIN1Q13526 163 aaPredicted RBP15.33■□□□□ 0.04
HDAC6-235ENST00000495515 FLOT2Q14254 428 aa15.33■□□□□ 0.04
HDAC6-235ENST00000495515 ZNF239Q16600 458 aaKnown RBP15.33■□□□□ 0.04
HDAC6-235ENST00000495515 EEF1A1P5Q5VTE0 462 aa15.33■□□□□ 0.04
HDAC6-235ENST00000495515 TTC33Q6PID6 262 aaPredicted RBP15.33■□□□□ 0.04
HDAC6-235ENST00000495515 GDF7Q7Z4P5 450 aa15.33■□□□□ 0.04
HDAC6-235ENST00000495515 MCEMP1Q8IX19 187 aa15.33■□□□□ 0.04
HDAC6-235ENST00000495515 AQP12AQ8IXF9 295 aa15.33■□□□□ 0.04
HDAC6-235ENST00000495515 SLC43A2Q8N370 569 aa15.33■□□□□ 0.04
HDAC6-235ENST00000495515 MARVELD2Q8N4S9 558 aa15.33■□□□□ 0.04
HDAC6-235ENST00000495515 FNDC9Q8TBE3 224 aa15.33■□□□□ 0.04
HDAC6-235ENST00000495515 ASB5Q8WWX0 329 aa15.33■□□□□ 0.04
HDAC6-235ENST00000495515 NAA11Q9BSU3 229 aaPredicted RBP15.33■□□□□ 0.04
HDAC6-235ENST00000495515 TMEM43Q9BTV4 400 aa15.33■□□□□ 0.04
HDAC6-235ENST00000495515 SLC19A3Q9BZV2 496 aa15.33■□□□□ 0.04
HDAC6-235ENST00000495515 MED12Q93074 2177 aa15.33■□□□□ 0.04
HDAC6-235ENST00000495515 TRAV36DV7A0A075B6V5 113 aa15.32■□□□□ 0.04
HDAC6-235ENST00000495515 ZC3H12DA2A288 527 aaKnown RBP15.32■□□□□ 0.04
HDAC6-235ENST00000495515 ACOT8O14734 319 aa15.32■□□□□ 0.04
HDAC6-235ENST00000495515 NPIPB7O75200 414 aa15.32■□□□□ 0.04
HDAC6-235ENST00000495515 RCBTB2O95199 551 aa15.32■□□□□ 0.04
HDAC6-235ENST00000495515 TGM6O95932 706 aa15.32■□□□□ 0.04
HDAC6-235ENST00000495515 CRHP06850 196 aa15.32■□□□□ 0.04
HDAC6-235ENST00000495515 RHCEP18577 417 aa15.32■□□□□ 0.04
HDAC6-235ENST00000495515 GTF2E2P29084 291 aaKnown RBP15.32■□□□□ 0.04
HDAC6-235ENST00000495515 CEACAM8P31997 349 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms