RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 ANXA11P50995 505 aaKnown RBP8.48□□□□□ -1.05
MSH5-218ENST00000494646 POLR2HP52434 150 aaKnown RBP8.48□□□□□ -1.05
MSH5-218ENST00000494646 POLR2JP52435 117 aaKnown RBP8.48□□□□□ -1.05
MSH5-218ENST00000494646 MVDP53602 400 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 FOXG1P55316 489 aaPredicted RBP8.48□□□□□ -1.05
MSH5-218ENST00000494646 BSPH1Q075Z2 132 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 LRRC74AQ0VAA2 488 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 FAPQ12884 760 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 GNA13Q14344 377 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 GSTA3Q16772 222 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 RPS26P11Q5JNZ5 115 aaPredicted RBP8.48□□□□□ -1.05
MSH5-218ENST00000494646 C6orf10Q5SRN2 563 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 MRPL2Q5T653 305 aaKnown RBP8.48□□□□□ -1.05
MSH5-218ENST00000494646 EPGNQ6UW88 154 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 RETREG3Q86VR2 466 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 CADM2Q8N3J6 435 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 ZNF611Q8N823 705 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 OR52P1PQ8NH57 321 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 SLC25A43Q8WUT9 341 aaPredicted RBP8.48□□□□□ -1.05
MSH5-218ENST00000494646 DDIT4LQ96D03 193 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 MUCL1Q96DR8 90 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 ZHX1-C8orf76Q96EF9 292 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 AURKBQ96GD4 344 aaPredicted RBP8.48□□□□□ -1.05
MSH5-218ENST00000494646 ITCHQ96J02 903 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 C1QTNF6Q9BXI9 259 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 TPT1P8Q9HAU6 139 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 NGBQ9NPG2 151 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 ZIM2Q9NZV7 527 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 HDGFL3Q9Y3E1 203 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 RNF115Q9Y4L5 304 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 CCT8L1PA6NM43 557 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 MRPL33O75394 65 aaKnown RBP8.47□□□□□ -1.05
MSH5-218ENST00000494646 RAD51DO75771 328 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 CNOT4O95628 575 aaKnown RBP8.47□□□□□ -1.05
MSH5-218ENST00000494646 BCHEP06276 602 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 TFPTP0C1Z6 253 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 PRG2P13727 222 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 GGT1P19440 569 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 CXCR1P25024 350 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 FKBP2P26885 142 aaKnown RBP8.47□□□□□ -1.05
MSH5-218ENST00000494646 CDKN1AP38936 164 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 ACAA2P42765 397 aaKnown RBP8.47□□□□□ -1.05
MSH5-218ENST00000494646 MAGEA8P43361 318 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 CLK1P49759 484 aaKnown RBP8.47□□□□□ -1.05
MSH5-218ENST00000494646 ATP5J2P56134 94 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 DSTNP60981 165 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 EPS8Q12929 822 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 BNIP2Q12982 314 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 CEACAM7Q14002 265 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 PPA1Q15181 289 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 C9orf135Q5VTT2 229 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 FBXW9Q5XUX1 488 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 ADAM5Q6NVV9 412 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 SLC2A7Q6PXP3 512 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 PRSS57Q6UWY2 283 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 ZNF836Q6ZNA1 936 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 CMIPQ8IY22 773 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 PEX5LQ8IYB4 626 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 MIER2Q8N344 545 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 CLIP4Q8N3C7 705 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 ZNF433Q8N7K0 673 aaPredicted RBP8.47□□□□□ -1.05
MSH5-218ENST00000494646 KBTBD8Q8NFY9 601 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 OR52E4Q8NGH9 312 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 OR52N5Q8NH56 324 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 SMAP2Q8WU79 429 aaPredicted RBP8.47□□□□□ -1.05
MSH5-218ENST00000494646 SLC38A5Q8WUX1 472 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 OIT3Q8WWZ8 545 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 IGFBPL1Q8WX77 278 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 GTF2H4Q92759 462 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 PMM1Q92871 262 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 TMEM19Q96HH6 336 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 EBF4Q9BQW3 602 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 NAA11Q9BSU3 229 aaPredicted RBP8.47□□□□□ -1.05
MSH5-218ENST00000494646 BDH2Q9BUT1 245 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 GSX2Q9BZM3 304 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 ADAM19Q9H013 955 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 RMND5AQ9H871 391 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 SLCO1B3Q9NPD5 702 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 SDR39U1Q9NRG7 319 aaPredicted RBP8.47□□□□□ -1.05
MSH5-218ENST00000494646 CISD1Q9NZ45 108 aaKnown RBP8.47□□□□□ -1.05
MSH5-218ENST00000494646 EMC3Q9P0I2 261 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 P2RX2Q9UBL9 471 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 DCTN4Q9UJW0 460 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 TRAPPC4Q9Y296 219 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 PCDHB14Q9Y5E9 798 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 USH1CQ9Y6N9 552 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 TLN2Q9Y4G6 2542 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 DNHD1Q96M86 4753 aa8.47□□□□□ -1.05
MSH5-218ENST00000494646 NSD1Q96L73 2696 aaPredicted RBP8.46□□□□□ -1.06
MSH5-218ENST00000494646 IGKV3D-15A0A087WSY6 115 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 CDHR4A6H8M9 788 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 CLIC1O00299 241 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 TPD52L2O43399 206 aaKnown RBP8.46□□□□□ -1.06
MSH5-218ENST00000494646 ICMTO60725 284 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 AKR7A3O95154 331 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 PGM3O95394 542 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 SOD3P08294 240 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 DANCRP0C864 163 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 ZCCHC18P0CG32 403 aa8.46□□□□□ -1.06
MSH5-218ENST00000494646 RPS4Y1P22090 263 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 573.7 ms