RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 NRF1Q16656 503 aa20.92■□□□□ 0.94
CLIC3-203ENST00000494426 GKAP1Q5VSY0 366 aaPredicted RBP20.92■□□□□ 0.94
CLIC3-203ENST00000494426 FCRLAQ7L513 359 aa20.92■□□□□ 0.94
CLIC3-203ENST00000494426 FAM214BQ7L5A3 538 aa20.92■□□□□ 0.94
CLIC3-203ENST00000494426 OR4D11Q8NGI4 311 aa20.92■□□□□ 0.94
CLIC3-203ENST00000494426 RNASE6Q93091 150 aaKnown RBP20.92■□□□□ 0.94
CLIC3-203ENST00000494426 DDIT4LQ96D03 193 aa20.92■□□□□ 0.94
CLIC3-203ENST00000494426 GMPPAQ96IJ6 420 aaPredicted RBP20.92■□□□□ 0.94
CLIC3-203ENST00000494426 KLHL28Q9NXS3 571 aa20.92■□□□□ 0.94
CLIC3-203ENST00000494426 ING1Q9UK53 422 aaPredicted RBP20.92■□□□□ 0.94
CLIC3-203ENST00000494426 A0A1B0GWA3 101 aa20.91■□□□□ 0.94
CLIC3-203ENST00000494426 ELOVL7A1L3X0 281 aa20.91■□□□□ 0.94
CLIC3-203ENST00000494426 A8MXE2 369 aa20.91■□□□□ 0.94
CLIC3-203ENST00000494426 FESP07332 822 aa20.91■□□□□ 0.94
CLIC3-203ENST00000494426 RGS8P57771 180 aaPredicted RBP20.91■□□□□ 0.94
CLIC3-203ENST00000494426 PSME3P61289 254 aa20.91■□□□□ 0.94
CLIC3-203ENST00000494426 NPTX1Q15818 432 aa20.91■□□□□ 0.94
CLIC3-203ENST00000494426 MEX3BQ6ZN04 569 aaKnown RBP20.91■□□□□ 0.94
CLIC3-203ENST00000494426 LUZP2Q86TE4 346 aa20.91■□□□□ 0.94
CLIC3-203ENST00000494426 DMRTC2Q8IXT2 367 aaPredicted RBP20.91■□□□□ 0.94
CLIC3-203ENST00000494426 FITM2Q8N6M3 262 aa20.91■□□□□ 0.94
CLIC3-203ENST00000494426 OR52E4Q8NGH9 312 aa20.91■□□□□ 0.94
CLIC3-203ENST00000494426 POTEKPQ9BYX7 375 aa20.91■□□□□ 0.94
CLIC3-203ENST00000494426 EVA1AQ9H8M9 152 aa20.91■□□□□ 0.94
CLIC3-203ENST00000494426 GLRX2Q9NS18 164 aa20.91■□□□□ 0.94
CLIC3-203ENST00000494426 TMEM181Q9P2C4 612 aa20.91■□□□□ 0.94
CLIC3-203ENST00000494426 ABCD2Q9UBJ2 740 aa20.91■□□□□ 0.94
CLIC3-203ENST00000494426 TESQ9UGI8 421 aaKnown RBP20.91■□□□□ 0.94
CLIC3-203ENST00000494426 TAGLN3Q9UI15 199 aa20.91■□□□□ 0.94
CLIC3-203ENST00000494426 SLC13A4Q9UKG4 626 aa20.91■□□□□ 0.94
CLIC3-203ENST00000494426 TRAPPC4Q9Y296 219 aa20.91■□□□□ 0.94
CLIC3-203ENST00000494426 HNRNPRO43390 633 aaKnown RBP20.9■□□□□ 0.94
CLIC3-203ENST00000494426 PRKD3O94806 890 aa20.9■□□□□ 0.94
CLIC3-203ENST00000494426 COX6B1P14854 86 aa20.9■□□□□ 0.94
CLIC3-203ENST00000494426 KDELR2P33947 212 aa20.9■□□□□ 0.94
CLIC3-203ENST00000494426 CSNK2A1P68400 391 aaPredicted RBP20.9■□□□□ 0.94
CLIC3-203ENST00000494426 SNTB1Q13884 538 aaKnown RBP20.9■□□□□ 0.94
CLIC3-203ENST00000494426 OR1Q1Q15612 314 aa20.9■□□□□ 0.94
CLIC3-203ENST00000494426 GTF2IRD2BQ6EKJ0 949 aa20.9■□□□□ 0.94
CLIC3-203ENST00000494426 C6orf89Q6UWU4 347 aa20.9■□□□□ 0.94
CLIC3-203ENST00000494426 GTF2IRD2Q86UP8 949 aa20.9■□□□□ 0.94
CLIC3-203ENST00000494426 RBM45Q8IUH3 476 aaKnown RBP20.9■□□□□ 0.94
CLIC3-203ENST00000494426 OR6T1Q8NGN1 323 aa20.9■□□□□ 0.94
CLIC3-203ENST00000494426 SLC26A7Q8TE54 656 aa20.9■□□□□ 0.94
CLIC3-203ENST00000494426 ZNF559Q9BR84 538 aa20.9■□□□□ 0.94
CLIC3-203ENST00000494426 TRIM2Q9C040 744 aa20.9■□□□□ 0.94
CLIC3-203ENST00000494426 OPN3Q9H1Y3 402 aaPredicted RBP20.9■□□□□ 0.94
CLIC3-203ENST00000494426 MPDZO75970 2070 aa20.9■□□□□ 0.94
CLIC3-203ENST00000494426 A8MVM7 634 aa20.89■□□□□ 0.93
CLIC3-203ENST00000494426 ZNF814B7Z6K7 855 aa20.89■□□□□ 0.93
CLIC3-203ENST00000494426 MSTNO14793 375 aa20.89■□□□□ 0.93
CLIC3-203ENST00000494426 CYTIPO60759 359 aa20.89■□□□□ 0.93
CLIC3-203ENST00000494426 NPIPB7O75200 414 aa20.89■□□□□ 0.93
CLIC3-203ENST00000494426 SMNDC1O75940 238 aaKnown RBP eCLIP20.89■□□□□ 0.93
CLIC3-203ENST00000494426 PLGP00747 810 aaPredicted RBP20.89■□□□□ 0.93
CLIC3-203ENST00000494426 AGTR1P30556 359 aa20.89■□□□□ 0.93
CLIC3-203ENST00000494426 UQCRC1P31930 480 aa20.89■□□□□ 0.93
CLIC3-203ENST00000494426 GSK3BP49841 420 aa20.89■□□□□ 0.93
CLIC3-203ENST00000494426 OR2B6P58173 313 aa20.89■□□□□ 0.93
CLIC3-203ENST00000494426 EGR4Q05215 589 aa20.89■□□□□ 0.93
CLIC3-203ENST00000494426 RNPS1Q15287 305 aaKnown RBP20.89■□□□□ 0.93
CLIC3-203ENST00000494426 ZNF474Q6S9Z5 364 aaPredicted RBP20.89■□□□□ 0.93
CLIC3-203ENST00000494426 TUSC5Q8IXB3 177 aa20.89■□□□□ 0.93
CLIC3-203ENST00000494426 SLC43A2Q8N370 569 aa20.89■□□□□ 0.93
CLIC3-203ENST00000494426 CCDC197Q8NCU1 140 aa20.89■□□□□ 0.93
CLIC3-203ENST00000494426 MARVELD3Q96A59 401 aa20.89■□□□□ 0.93
CLIC3-203ENST00000494426 PSD2Q9BQI7 771 aa20.89■□□□□ 0.93
CLIC3-203ENST00000494426 C12orf10Q9HB07 376 aa20.89■□□□□ 0.93
CLIC3-203ENST00000494426 PLSCR4Q9NRQ2 329 aa20.89■□□□□ 0.93
CLIC3-203ENST00000494426 RPS6KB2Q9UBS0 482 aa20.89■□□□□ 0.93
CLIC3-203ENST00000494426 ADGRG4Q8IZF6 3080 aa20.89■□□□□ 0.93
CLIC3-203ENST00000494426 DNPH1O43598 174 aa20.88■□□□□ 0.93
CLIC3-203ENST00000494426 CD8BP10966 210 aa20.88■□□□□ 0.93
CLIC3-203ENST00000494426 CTBP2P56545 445 aa20.88■□□□□ 0.93
CLIC3-203ENST00000494426 H3F3AP84243 136 aa20.88■□□□□ 0.93
CLIC3-203ENST00000494426 MCEMP1Q8IX19 187 aa20.88■□□□□ 0.93
CLIC3-203ENST00000494426 ZNF295-AS1Q8N0V1 137 aa20.88■□□□□ 0.93
CLIC3-203ENST00000494426 ZNF610Q8N9Z0 462 aa20.88■□□□□ 0.93
CLIC3-203ENST00000494426 OR6K3Q8NGY3 331 aa20.88■□□□□ 0.93
CLIC3-203ENST00000494426 RASSF5Q8WWW0 418 aa20.88■□□□□ 0.93
CLIC3-203ENST00000494426 MCHR1Q99705 422 aa20.88■□□□□ 0.93
CLIC3-203ENST00000494426 RBM24Q9BX46 236 aaKnown RBP20.88■□□□□ 0.93
CLIC3-203ENST00000494426 ALG2Q9H553 416 aa20.88■□□□□ 0.93
CLIC3-203ENST00000494426 FOXD3Q9UJU5 478 aaPredicted RBP20.88■□□□□ 0.93
CLIC3-203ENST00000494426 EMC9Q9Y3B6 208 aa20.88■□□□□ 0.93
CLIC3-203ENST00000494426 A0A0B4J2E0 115 aa20.87■□□□□ 0.93
CLIC3-203ENST00000494426 A0A1B0GX12 115 aa20.87■□□□□ 0.93
CLIC3-203ENST00000494426 RAMP1O60894 148 aa20.87■□□□□ 0.93
CLIC3-203ENST00000494426 PRF1P14222 555 aa20.87■□□□□ 0.93
CLIC3-203ENST00000494426 FPR1P21462 350 aa20.87■□□□□ 0.93
CLIC3-203ENST00000494426 RASGEF1BQ0VAM2 473 aa20.87■□□□□ 0.93
CLIC3-203ENST00000494426 KRT72Q14CN4 511 aa20.87■□□□□ 0.93
CLIC3-203ENST00000494426 ABLIM2Q6H8Q1 611 aa20.87■□□□□ 0.93
CLIC3-203ENST00000494426 ULK3Q6PHR2 472 aa20.87■□□□□ 0.93
CLIC3-203ENST00000494426 NUFIP2Q7Z417 695 aaKnown RBP20.87■□□□□ 0.93
CLIC3-203ENST00000494426 RANBP3LQ86VV4 465 aaPredicted RBP20.87■□□□□ 0.93
CLIC3-203ENST00000494426 TSPYL5Q86VY4 417 aaPredicted RBP20.87■□□□□ 0.93
CLIC3-203ENST00000494426 VANGL1Q8TAA9 524 aaPredicted RBP20.87■□□□□ 0.93
CLIC3-203ENST00000494426 STK35Q8TDR2 534 aa20.87■□□□□ 0.93
CLIC3-203ENST00000494426 DNAJA4Q8WW22 397 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms