RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 ACTR1AP61163 376 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 MESP2Q0VG99 397 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 CCINQ13939 588 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 FGFBP1Q14512 234 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 DEFB134Q4QY38 66 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 ACSM3Q53FZ2 586 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 ALG10BQ5I7T1 473 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 EMC4Q5J8M3 183 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 C6orf183Q5T699 404 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 WDR88Q6ZMY6 472 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 BTN2A1Q7KYR7 527 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 SHFQ7M4L6 423 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 ZNF595Q8IYB9 648 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 ZFP41Q8N8Y5 198 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 KCT2Q8NC54 265 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 FAM98AQ8NCA5 519 aaKnown RBP10.59□□□□□ -0.71
RFC4-214ENST00000494047 BBS1Q8NFJ9 593 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 OR4M1Q8NGD0 313 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 OR14A16Q8NHC5 309 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 NACC2Q96BF6 587 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 SGTBQ96EQ0 304 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 PGLYRP3Q96LB9 341 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 CCDC3Q9BQI4 270 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 FGF22Q9HCT0 170 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 PRMT8Q9NR22 394 aaPredicted RBP10.59□□□□□ -0.71
RFC4-214ENST00000494047 KLHL1Q9NR64 748 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 MAT2BQ9NZL9 334 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 MRTO4Q9UKD2 239 aaKnown RBP10.59□□□□□ -0.71
RFC4-214ENST00000494047 ZNF337Q9Y3M9 751 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 HS3ST3A1Q9Y663 406 aa10.59□□□□□ -0.71
RFC4-214ENST00000494047 PTPRZ1P23471 2315 aaPredicted RBP10.59□□□□□ -0.71
RFC4-214ENST00000494047 FAM186AA6NE01 2351 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 A0A0G2JMP0 313 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 A0A0X1KG70 313 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 A6NCN8 305 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 CLDN4O14493 209 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 OR10H2O60403 315 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 DNAJB6O75190 326 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 TGM6O95932 706 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 RAF1P04049 648 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 PRKCAP17252 672 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 MAKP20794 623 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 HTR2AP28223 471 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 SSTR4P31391 388 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 RCVRNP35243 200 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 RABIFP47224 123 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 GDI2P50395 445 aaKnown RBP10.58□□□□□ -0.72
RFC4-214ENST00000494047 CAPZA1P52907 286 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 SIRPAP78324 504 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 MRPS21P82921 87 aaKnown RBP10.58□□□□□ -0.72
RFC4-214ENST00000494047 SSBP1Q04837 148 aaKnown RBP10.58□□□□□ -0.72
RFC4-214ENST00000494047 ZNF750Q32MQ0 723 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 METTL11BQ5VVY1 283 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 FBXO42Q6P3S6 717 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 LINC00114Q6XXX2 140 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 SLC35F3Q8IY50 421 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 TMEM99Q8N816 258 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 ZNF527Q8NB42 609 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 NLGN4YQ8NFZ3 816 aaPredicted RBP10.58□□□□□ -0.72
RFC4-214ENST00000494047 OR4M2Q8NGB6 313 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 FLVCR1-AS1Q8TAF5 88 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 RPS4Y2Q8TD47 263 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 SNX33Q8WV41 574 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 LIPHQ8WWY8 451 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 THAP4Q8WY91 577 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 KLK6Q92876 244 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 PHF21AQ96BD5 680 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 ZG16BQ96DA0 208 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 DCLRE1CQ96SD1 692 aaKnown RBP10.58□□□□□ -0.72
RFC4-214ENST00000494047 TMEM168Q9H0V1 697 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 OR51J1Q9H342 316 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 GPN1Q9HCN4 374 aaPredicted RBP10.58□□□□□ -0.72
RFC4-214ENST00000494047 TAS2R8Q9NYW2 309 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 PRODH2Q9UF12 536 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 TBC1D29Q9UFV1 150 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 SCP2D1Q9UJQ7 156 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 TMEM14AQ9Y6G1 99 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 CLCA3PQ9Y6N3 262 aa10.58□□□□□ -0.72
RFC4-214ENST00000494047 TEX51A0A1B0GUA7 166 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 C2orf92A0A1B0GVN3 265 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 A0A1B0GWA3 101 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 SLC9B1P1A6NJY1 282 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 CHURC1-FNTBB4DL54 471 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 GABARAPH6UMI1 98 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 J3QLW9 94 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 AIPO00170 330 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 CYR61O00622 381 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 SRPX2O60687 465 aaPredicted RBP10.57□□□□□ -0.72
RFC4-214ENST00000494047 CPNE3O75131 537 aaKnown RBP10.57□□□□□ -0.72
RFC4-214ENST00000494047 TCRBP04435 133 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 EPXP11678 715 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 RNH1P13489 461 aaKnown RBP10.57□□□□□ -0.72
RFC4-214ENST00000494047 HOXB2P14652 356 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 CPN1P15169 458 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 ZNF19P17023 458 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 HOXA6P31267 233 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 ADH7P40394 386 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 BLKP51451 505 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 BLVRAP53004 296 aa10.57□□□□□ -0.72
RFC4-214ENST00000494047 SLC25A1P53007 311 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms