RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 HAGHLQ6PII5 290 aaPredicted RBP10.72□□□□□ -0.69
BRCA1-222ENST00000493919 TIPARPQ7Z3E1 657 aaKnown RBP10.72□□□□□ -0.69
BRCA1-222ENST00000493919 PIM3Q86V86 326 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 SLC22A15Q8IZD6 547 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 ZNF283Q8N7M2 679 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 DNAAF1Q8NEP3 725 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 OR5AR1Q8NGP9 310 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 OR5J2Q8NH18 312 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 MITD1Q8WV92 249 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 AP3S1Q92572 193 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 FAHD2AQ96GK7 314 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 MS4A3Q96HJ5 214 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 GAL3ST4Q96RP7 486 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 SCNM1Q9BWG6 230 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 CSTL1Q9H114 145 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 DCSTAMPQ9H295 470 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 HEXA-AS1Q9H8Q6 139 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 NRIP3Q9NQ35 241 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 DHCR7Q9UBM7 475 aaKnown RBP10.72□□□□□ -0.69
BRCA1-222ENST00000493919 KLK13Q9UKR3 277 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 CAMK2AQ9UQM7 478 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 CDYLQ9Y232 598 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 HEBP2Q9Y5Z4 205 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 COLEC10Q9Y6Z7 277 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 PTPRBP23467 1997 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 MCIDASD6RGH6 385 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 HCN1O60741 890 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 ERAL1O75616 437 aaKnown RBP10.72□□□□□ -0.69
BRCA1-222ENST00000493919 WDR47O94967 919 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 MT-CO3P00414 261 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 AMD1P17707 334 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 MPSTP25325 297 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 CSF2RBP32927 897 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 UBE2G2P60604 165 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 SLAMF1Q13291 335 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 LAPTM4AQ15012 233 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 Q5PR19 223 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 PLEKHS1Q5SXH7 462 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 CATSPEREQ5SY80 951 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 SLC26A11Q86WA9 606 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 ANGPTL5Q86XS5 388 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 GRHL3Q8TE85 626 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 CYGBQ8WWM9 190 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 RAB3CQ96E17 227 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 COQ10BQ9H8M1 238 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 MAN2C1Q9NTJ4 1040 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 TAS2R13Q9NYV9 303 aa10.72□□□□□ -0.69
BRCA1-222ENST00000493919 UNC13CQ8NB66 2214 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 A0A1B0GW55 424 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 FAM95CA0A1B0GW59 222 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 FAM159BA6NKW6 160 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 NTN3O00634 580 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-222ENST00000493919 KLF11O14901 512 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 LCMT2O60294 686 aaKnown RBP10.71□□□□□ -0.69
BRCA1-222ENST00000493919 CSO75390 466 aaKnown RBP10.71□□□□□ -0.69
BRCA1-222ENST00000493919 GLCEO94923 617 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 SLCO2B1O94956 709 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 ABHD2P08910 425 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 DUX4L2P0CJ85 424 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 DUX4L3P0CJ86 424 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 DUX4L4P0CJ87 422 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 DUX4L5P0CJ88 424 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 DUX4L6P0CJ89 424 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 DUX4L7P0CJ90 424 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 NDUFS1P28331 727 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 PRKXP51817 358 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 PDX1P52945 283 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 PGGT1BP53609 377 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 EPHA4P54764 986 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 CDKN2DP55273 166 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 DCAF10Q5QP82 559 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 PHF19Q5T6S3 580 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 HECTD2Q5U5R9 776 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 FAM45BPQ6NSW5 357 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 TMPRSS7Q7RTY8 843 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 B3GNT8Q7Z7M8 397 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 TMPRSS12Q86WS5 348 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 LILRA2Q8N149 483 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 BPIFCQ8NFQ6 507 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 OR5T3Q8NGG3 340 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 OR52E1Q8NGJ3 308 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 MCFD2Q8NI22 146 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 FAM45AQ8TCE6 357 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 CD200R1Q8TD46 325 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 TSEN15Q8WW01 171 aaKnown RBP10.71□□□□□ -0.69
BRCA1-222ENST00000493919 ASB15Q8WXK1 588 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 PRR11Q96HE9 360 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-222ENST00000493919 LRR1Q96L50 414 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 NOL4LQ96MY1 436 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-222ENST00000493919 SLIRPQ9GZT3 109 aaKnown RBP10.71□□□□□ -0.69
BRCA1-222ENST00000493919 LHPPQ9H008 270 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 KIR3DX1Q9H7L2 352 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 LATS2Q9NRM7 1088 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 DUX4Q9UBX2 424 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 PLAGL1Q9UM63 463 aa10.71□□□□□ -0.69
BRCA1-222ENST00000493919 COL27A1Q8IZC6 1860 aaPredicted RBP10.71□□□□□ -0.7
BRCA1-222ENST00000493919 TEX13DA0A0J9YY54 714 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-222ENST00000493919 CBY3A6NI87 242 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 TRIM49D1C9J1S8 452 aa10.7□□□□□ -0.7
BRCA1-222ENST00000493919 NR5A2O00482 541 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms