RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 PCGF2P35227 344 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 RPS5P46782 204 aaKnown RBP7.37□□□□□ -1.23
BRCA1-221ENST00000493795 SUB1P53999 127 aaKnown RBP eCLIP7.37□□□□□ -1.23
BRCA1-221ENST00000493795 CXCR4P61073 352 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 SELENOWP63302 87 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 GPR18Q14330 331 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 MEPCEQ7L2J0 689 aaKnown RBP7.37□□□□□ -1.23
BRCA1-221ENST00000493795 SERPINA11Q86U17 422 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 OR1J2Q8NGS2 313 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 OR5H6Q8NGV6 325 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 ZNF596Q8TC21 504 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 NETO1Q8TDF5 533 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 DCLRE1CQ96SD1 692 aaKnown RBP7.37□□□□□ -1.23
BRCA1-221ENST00000493795 ALOXE3Q9BYJ1 711 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 ANKRD60Q9BZ19 345 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 ZCCHC4Q9H5U6 513 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 FBXL2Q9UKC9 423 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 VDAC3Q9Y277 283 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 XKRY2A2RUG3 117 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 PPP5D1E7EU14 171 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 MAN2B1O00754 1011 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 FCGR2AP12318 317 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 IL1RNP18510 177 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 ECI1P42126 302 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 HHEXQ03014 270 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 ZNF33BQ06732 778 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 CEACAM7Q14002 265 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 CLINT1Q14677 625 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 C6orf89Q6UWU4 347 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 LBX2Q6XYB7 198 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 SLC46A3Q7Z3Q1 461 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 DNAJC5GQ8N7S2 189 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 SMOQ99835 787 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 ZFYVE21Q9BQ24 234 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 CLSTN3Q9BQT9 956 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 SLCO5A1Q9H2Y9 848 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 NTN4Q9HB63 628 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 DMAC2Q9NW81 257 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 CAMK2AQ9UQM7 478 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 OR6C68A6NDL8 312 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 ZNF487B1APH4 448 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 M0R3H8 397 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 SLC43A1O75387 559 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 HEXAP06865 529 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 GLYR1Q49A26 553 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-221ENST00000493795 LYPD4Q6UWN0 246 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 CLEC1AQ8NC01 280 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 SECTM1Q8WVN6 248 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 TSACCQ96A04 125 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-221ENST00000493795 NDFIP1Q9BT67 221 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 SEMA4CQ9C0C4 833 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 SMG9Q9H0W8 520 aaKnown RBP7.37□□□□□ -1.23
BRCA1-221ENST00000493795 DDX31Q9H8H2 851 aaKnown RBP7.37□□□□□ -1.23
BRCA1-221ENST00000493795 SLC6A20Q9NP91 592 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 EXOSC3Q9NQT5 275 aaKnown RBP7.37□□□□□ -1.23
BRCA1-221ENST00000493795 KCMF1Q9P0J7 381 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 A0A0D9SEW6 157 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 A0A1W2PQ09 198 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 METTL15A6NJ78 407 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 AQP7O14520 342 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 ADAM12O43184 909 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 ADAM23O75077 832 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 PTBP3O95758 552 aaKnown RBP7.36□□□□□ -1.23
BRCA1-221ENST00000493795 S1PR4O95977 384 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 CD63P08962 238 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 HOXA10P31260 410 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-221ENST00000493795 RABIFP47224 123 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 INCA1Q0VD86 236 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 SLC14A2Q15849 920 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 LCTLQ6UWM7 567 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 Q6ZRG5 221 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 USP53Q70EK8 1073 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 NDUFAF7Q7L592 441 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 OR2M7Q8NG81 312 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 ANGPTL6Q8NI99 470 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 TMEM163Q8TC26 289 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 SCAMP4Q969E2 229 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 PLK3Q9H4B4 646 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 DECR2Q9NUI1 292 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 USP36Q9P275 1121 aaKnown RBP7.36□□□□□ -1.23
BRCA1-221ENST00000493795 FBXL4Q9UKA2 621 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 LHX6Q9UPM6 363 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 PTGDR2Q9Y5Y4 395 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 ADGRB3O60242 1522 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 OR6C76A6NM76 312 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 SUSD5O60279 629 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 B3GALNT1O75752 331 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 USF1P22415 310 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-221ENST00000493795 GPR17Q13304 367 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 MBTPS1Q14703 1052 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 RPL7L1Q6DKI1 246 aaKnown RBP7.36□□□□□ -1.23
BRCA1-221ENST00000493795 VN1R3Q9BXE9 311 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 NIT2Q9NQR4 276 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 SPHK2Q9NRA0 654 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 CNOT2Q9NZN8 540 aaKnown RBP7.36□□□□□ -1.23
BRCA1-221ENST00000493795 DNMT3BQ9UBC3 853 aaKnown RBP7.36□□□□□ -1.23
BRCA1-221ENST00000493795 ZNF281Q9Y2X9 895 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 KPTNQ9Y664 436 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 ZFP92A6NM28 416 aa7.36□□□□□ -1.23
BRCA1-221ENST00000493795 PRSS44E7EML9 344 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms