RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 ASF1BQ9NVP2 202 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 AHSPQ9NZD4 102 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 DPP7Q9UHL4 492 aa10.81□□□□□ -0.68
HDAC4-210ENST00000493582 FEZF1A0PJY2 475 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 IFITM5A6NNB3 132 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 NEDD8-MDP1E9PL57 170 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 UBBP0CG47 229 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 UBCP0CG48 685 aaKnown RBP10.8□□□□□ -0.68
HDAC4-210ENST00000493582 SRMP19623 302 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 NPBWR1P48145 328 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 RGS8P57771 180 aaPredicted RBP10.8□□□□□ -0.68
HDAC4-210ENST00000493582 RPS27AP62979 156 aaKnown RBP10.8□□□□□ -0.68
HDAC4-210ENST00000493582 UBA52P62987 128 aaKnown RBP10.8□□□□□ -0.68
HDAC4-210ENST00000493582 DECR1Q16698 335 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 LRRC37A5PQ49AS3 106 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 C4orf46Q504U0 113 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 KHDRBS2Q5VWX1 349 aaKnown RBP10.8□□□□□ -0.68
HDAC4-210ENST00000493582 DHRS7BQ6IAN0 325 aaPredicted RBP10.8□□□□□ -0.68
HDAC4-210ENST00000493582 TMEM71Q6P5X7 295 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 ZCCHC12Q6PEW1 402 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 NUDT18Q6ZVK8 323 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 MBOAT2Q6ZWT7 520 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 DUSP19Q8WTR2 217 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 INTS12Q96CB8 462 aaKnown RBP10.8□□□□□ -0.68
HDAC4-210ENST00000493582 SLC41A3Q96GZ6 507 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 TRMT61BQ9BVS5 477 aaKnown RBP10.8□□□□□ -0.68
HDAC4-210ENST00000493582 SGPP1Q9BX95 441 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 PIGMQ9H3S5 423 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 EPHA6Q9UF33 1036 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 PCOLCE2Q9UKZ9 415 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 SLC7A7Q9UM01 511 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 FOXJ3Q9UPW0 622 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 ANKRD61A6NGH8 418 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 OR6C76A6NM76 312 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 FCMRO60667 390 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 ERAL1O75616 437 aaKnown RBP10.8□□□□□ -0.68
HDAC4-210ENST00000493582 S100A9P06702 114 aaKnown RBP10.8□□□□□ -0.68
HDAC4-210ENST00000493582 DPP4P27487 766 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 MECP2P51608 486 aaKnown RBP10.8□□□□□ -0.68
HDAC4-210ENST00000493582 NCBP2P52298 156 aaKnown RBP eCLIP10.8□□□□□ -0.684e-7■■■□□ 17.3
HDAC4-210ENST00000493582 PDZK1IP1Q13113 114 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 ATXN7L3Q14CW9 347 aaPredicted RBP10.8□□□□□ -0.68
HDAC4-210ENST00000493582 H3F3CQ6NXT2 135 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 C5orf46Q6UWT4 87 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 TCEAL3Q969E4 200 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 FBXO17Q96EF6 278 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 AMDHD1Q96NU7 426 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 FAM117AQ9C073 453 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 MIOXQ9UGB7 285 aa10.8□□□□□ -0.68
HDAC4-210ENST00000493582 CASP8AP2Q9UKL3 1982 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 TRBV2A0A0J9YWF9 115 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 A0A1W2PS29 197 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 RAB19A4D1S5 217 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 LRIT2A6NDA9 550 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 RFPL4AA6NLU0 287 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 RFPL4AL1F8VTS6 287 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 PIN1P1O15428 100 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 SULT1B1O43704 296 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 SNAPINO95295 136 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 C8orf89P0DMQ9 161 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 PSMB10P40306 273 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 FRKP42685 505 aaPredicted RBP10.79□□□□□ -0.68
HDAC4-210ENST00000493582 CLDN2P57739 230 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 PPP2CBP62714 309 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 PPIAP62937 165 aaKnown RBP10.79□□□□□ -0.68
HDAC4-210ENST00000493582 PPP2CAP67775 309 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 LMAN2Q12907 356 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 KRT33BQ14525 404 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 PCGF3Q3KNV8 242 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 THSD4Q6ZMP0 1018 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 OR51L1Q8NGJ5 315 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 ZNF251Q9BRH9 671 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 C1QTNF2Q9BXJ5 285 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 TMEM231Q9H6L2 316 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 CACYBPQ9HB71 228 aaKnown RBP10.79□□□□□ -0.68
HDAC4-210ENST00000493582 IL21RQ9HBE5 538 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 NRIP3Q9NQ35 241 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 LHX9Q9NQ69 397 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 C20orf141Q9NUB4 165 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 GPN3Q9UHW5 284 aaPredicted RBP10.79□□□□□ -0.68
HDAC4-210ENST00000493582 MKL2Q9ULH7 1088 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 MEIS3P1A6NDR6 274 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 SLC22A31A6NKX4 558 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 TMEM189-UBE2V1I3L0A0 370 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 BHLHE40O14503 412 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 GNB5O14775 395 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 STATHP02808 62 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 CKMP06732 381 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 HMGA1P17096 107 aaKnown RBP10.79□□□□□ -0.68
HDAC4-210ENST00000493582 BMP7P18075 431 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 MAPK3P27361 379 aaPredicted RBP10.79□□□□□ -0.68
HDAC4-210ENST00000493582 SNRPD1P62314 119 aaKnown RBP10.79□□□□□ -0.68
HDAC4-210ENST00000493582 DCDP81605 110 aaKnown RBP10.79□□□□□ -0.68
HDAC4-210ENST00000493582 STX4Q12846 297 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 COL19A1Q14993 1142 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 DEFB115Q30KQ5 88 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 OVCH1Q7RTY7 1134 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 OR4C16Q8NGL9 310 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 EDARADDQ8WWZ3 215 aa10.79□□□□□ -0.68
HDAC4-210ENST00000493582 LINC01599Q8WXQ3 324 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms