RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 PNMTP11086 282 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 ANPEPP15144 967 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 GCKP35557 465 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 APOBEC1P41238 236 aaKnown RBP12.11□□□□□ -0.47
MSH6-208ENST00000493177 ADORA2A-AS1P86434 159 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 EXOC3L2Q2M3D2 409 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 HYAL4Q2M3T9 481 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 GLYR1Q49A26 553 aaPredicted RBP12.11□□□□□ -0.47
MSH6-208ENST00000493177 DCST1Q5T197 706 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 SP5Q6BEB4 398 aaPredicted RBP12.11□□□□□ -0.47
MSH6-208ENST00000493177 ATG4DQ86TL0 474 aaPredicted RBP12.11□□□□□ -0.47
MSH6-208ENST00000493177 NKAIN4Q8IVV8 208 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 PQLC1Q8N2U9 271 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 ICA1LQ8NDH6 482 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 POC1BQ8TC44 478 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 CA5BP1Q8WTZ4 195 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 SLC38A4Q969I6 547 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 SARAFQ96BY9 339 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 SDCCAG3Q96C92 435 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 NPAS1Q99742 590 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 ADAM19Q9H013 955 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 DCLRE1BQ9H816 532 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 ZDHHC11Q9H8X9 412 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 CHST11Q9NPF2 352 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 SERINC1Q9NRX5 453 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 QPCTLQ9NXS2 382 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 ALKBH4Q9NXW9 302 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 VNN3Q9NY84 501 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 OSGIN1Q9UJX0 560 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 PRDM4Q9UKN5 801 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 ACAD8Q9UKU7 415 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 TMED7Q9Y3B3 224 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 KLF2Q9Y5W3 355 aaPredicted RBP12.11□□□□□ -0.47
MSH6-208ENST00000493177 LIPGQ9Y5X9 500 aa12.11□□□□□ -0.47
MSH6-208ENST00000493177 NCOA6Q14686 2063 aaPredicted RBP12.1□□□□□ -0.47
MSH6-208ENST00000493177 FREM3P0C091 2139 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 PHF3Q92576 2039 aaKnown RBP12.1□□□□□ -0.47
MSH6-208ENST00000493177 TRGV5A0A0B4J1U4 118 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 TMEM72A0PK05 275 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 OR2M5A3KFT3 312 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 FIGNL2A6NMB9 653 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 SUSD5O60279 629 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 MGRN1O60291 552 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 CELA3AP09093 270 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 ZNF17P17021 662 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 FUT4P22083 530 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 ADH6P28332 368 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 DNAJA1P31689 397 aaKnown RBP12.1□□□□□ -0.47
MSH6-208ENST00000493177 ARHGDIAP52565 204 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 IST1P53990 364 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 SLC25A53Q5H9E4 307 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 SWT1Q5T5J6 900 aaKnown RBP12.1□□□□□ -0.47
MSH6-208ENST00000493177 WLSQ5T9L3 541 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 HMBOX1Q6NT76 420 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 TTC33Q6PID6 262 aaPredicted RBP12.1□□□□□ -0.47
MSH6-208ENST00000493177 ZNF730Q6ZMV8 503 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 RRM2BQ7LG56 351 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 FGD2Q7Z6J4 655 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 LSRQ86X29 649 aaPredicted RBP12.1□□□□□ -0.47
MSH6-208ENST00000493177 LILRA2Q8N149 483 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 GTPBP8Q8N3Z3 284 aaPredicted RBP12.1□□□□□ -0.47
MSH6-208ENST00000493177 OR5M9Q8NGP3 310 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 TMEM255BQ8WV15 326 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 SMPDL3BQ92485 455 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 MARVELD3Q96A59 401 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 CENPNQ96H22 339 aaPredicted RBP12.1□□□□□ -0.47
MSH6-208ENST00000493177 MPP4Q96JB8 637 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 DHRS1Q96LJ7 313 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 ALPK1Q96QP1 1244 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 SLC6A15Q9H2J7 730 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 C12orf10Q9HB07 376 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 C6orf203Q9P0P8 240 aaPredicted RBP12.1□□□□□ -0.47
MSH6-208ENST00000493177 SLC6A5Q9Y345 797 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 MRPS18CQ9Y3D5 142 aaKnown RBP12.1□□□□□ -0.47
MSH6-208ENST00000493177 LYVE1Q9Y5Y7 322 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 SPIN1Q9Y657 262 aaPredicted RBP12.1□□□□□ -0.47
MSH6-208ENST00000493177 PCNX3Q9H6A9 2034 aa12.1□□□□□ -0.47
MSH6-208ENST00000493177 DNAJC13O75165 2243 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 ZNF407Q9C0G0 2248 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 A0A087WUJ7 227 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 TRBV4-1A0A0J9YWV2 114 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 A0A1W2PRQ8 180 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 OR14I1A6ND48 311 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 SAC3D1A6NKF1 404 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 H3BML4 177 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 KPNA4O00629 521 aaPredicted RBP12.09□□□□□ -0.47
MSH6-208ENST00000493177 CCNB2O95067 398 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 LYPD3O95274 346 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 NTN1O95631 604 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 ATP6V1G2O95670 118 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 TFPIP10646 304 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 PEPDP12955 493 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 COX6B1P14854 86 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 ZNF23P17027 643 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 AGAP20933 346 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 FPR1P21462 350 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 SELENBP1Q13228 472 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 DGCR6Q14129 220 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 GXYLT1Q4G148 440 aa12.09□□□□□ -0.47
MSH6-208ENST00000493177 PODNL1Q6PEZ8 512 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms