RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 GJA1P17302 382 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 CPT2P23786 658 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 HMGB2P26583 209 aaKnown RBP8.97□□□□□ -0.97
VPS8-225ENST00000492449 GABRR2P28476 465 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 ANXA11P50995 505 aaKnown RBP8.97□□□□□ -0.97
VPS8-225ENST00000492449 CASP9P55211 416 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 YBEYP58557 167 aaPredicted RBP8.97□□□□□ -0.97
VPS8-225ENST00000492449 NHLH2Q02577 135 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 BIKQ13323 160 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 NAE1Q13564 534 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 PNLIPRP3Q17RR3 467 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 NSUN5P2Q63ZY6 315 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 IZUMO1Q8IYV9 350 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 TMEM86AQ8N2M4 240 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 PRR18Q8N4B5 295 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 OR4Q3Q8NH05 313 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 LGALS14Q8TCE9 139 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 HMGB4Q8WW32 186 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 LCN9Q8WX39 176 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 EGLN3Q9H6Z9 239 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 CACFD1Q9UGQ2 172 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 MOKQ9UQ07 419 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 SLC35A3Q9Y2D2 325 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 PPP2R3BQ9Y5P8 575 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 MRPL42Q9Y6G3 142 aaKnown RBP8.97□□□□□ -0.97
VPS8-225ENST00000492449 FRMPD3Q5JV73 1810 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 NINQ8N4C6 2090 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 FAM157AC9JC47 383 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 SULT2B1O00204 365 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 FLRT2O43155 660 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 FADS1O60427 444 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 BRINP1O60477 761 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 SLC25A27O95847 323 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 F2P00734 622 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 C5AR1P21730 350 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 TBXA2RP21731 343 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 S100A2P29034 98 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 CASRP41180 1078 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 P2RX1P51575 399 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 HNRNPKP61978 463 aaKnown RBP eCLIP8.97□□□□□ -0.97
VPS8-225ENST00000492449 ACSM3Q53FZ2 586 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 CDPF1Q6NVV7 123 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 NDUFAF7Q7L592 441 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 IQCHQ86VS3 1027 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 PNLDC1Q8NA58 520 aaKnown RBP8.97□□□□□ -0.97
VPS8-225ENST00000492449 TNFAIP8L1Q8WVP5 186 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 MYLIPQ8WY64 445 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 SLC25A38Q96DW6 304 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 RSRP1Q9BUV0 290 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 GAR1Q9NY12 217 aaKnown RBP8.97□□□□□ -0.97
VPS8-225ENST00000492449 KLHL42Q9P2K6 505 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 POMT1Q9Y6A1 747 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 A0A0A6YYC8 382 aaPredicted RBP8.97□□□□□ -0.97
VPS8-225ENST00000492449 OR5H14A6NHG9 310 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 I3L1I5 382 aaPredicted RBP8.97□□□□□ -0.97
VPS8-225ENST00000492449 PIP5K1CO60331 668 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 RAMP2O60895 175 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 SLC25A14O95258 325 aaPredicted RBP8.97□□□□□ -0.97
VPS8-225ENST00000492449 MT-ND5P03915 603 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 ADH1AP07327 375 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 ANXA4P09525 319 aaPredicted RBP8.97□□□□□ -0.97
VPS8-225ENST00000492449 SFTA3P0C7M3 94 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 CR2P20023 1033 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 DCTDP32321 178 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 MAGEB1P43366 347 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 RPIAP49247 311 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 ADPRHP54922 357 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 TSPAN31Q12999 210 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 RBM39Q14498 530 aaKnown RBP8.97□□□□□ -0.97
VPS8-225ENST00000492449 NCMAPQ5T1S8 102 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 DMKNQ6E0U4 476 aaPredicted RBP8.97□□□□□ -0.97
VPS8-225ENST00000492449 BEST3Q8N1M1 668 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 BEND2Q8NDZ0 799 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 NUDCD2Q8WVJ2 157 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 SAT2Q96F10 170 aaPredicted RBP8.97□□□□□ -0.97
VPS8-225ENST00000492449 KRCC1Q9NPI7 259 aaPredicted RBP8.97□□□□□ -0.97
VPS8-225ENST00000492449 SEMA4GQ9NTN9 838 aa8.97□□□□□ -0.97
VPS8-225ENST00000492449 DRGXA6NNA5 263 aa8.96□□□□□ -0.97
VPS8-225ENST00000492449 FMO6PO60774 539 aa8.96□□□□□ -0.97
VPS8-225ENST00000492449 IFNA17P01571 189 aa8.96□□□□□ -0.97
VPS8-225ENST00000492449 RAB40ALP0C0E4 278 aa8.96□□□□□ -0.97
VPS8-225ENST00000492449 FAM157CP0CG43 387 aa8.96□□□□□ -0.97
VPS8-225ENST00000492449 PDHA2P29803 388 aa8.96□□□□□ -0.97
VPS8-225ENST00000492449 SLC26A5P58743 744 aa8.96□□□□□ -0.97
VPS8-225ENST00000492449 HNF4GQ14541 408 aa8.96□□□□□ -0.97
VPS8-225ENST00000492449 ARL9Q6T311 187 aa8.96□□□□□ -0.97
VPS8-225ENST00000492449 ADCK2Q7Z695 626 aa8.96□□□□□ -0.97
VPS8-225ENST00000492449 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.96□□□□□ -0.97
VPS8-225ENST00000492449 MON1AQ86VX9 555 aa8.96□□□□□ -0.97
VPS8-225ENST00000492449 RBM45Q8IUH3 476 aaKnown RBP8.96□□□□□ -0.97
VPS8-225ENST00000492449 GID4Q8IVV7 300 aa8.96□□□□□ -0.97
VPS8-225ENST00000492449 RNF175Q8N4F7 328 aa8.96□□□□□ -0.97
VPS8-225ENST00000492449 OR5AP2Q8NGF4 316 aa8.96□□□□□ -0.97
VPS8-225ENST00000492449 OR5M8Q8NGP6 311 aa8.96□□□□□ -0.97
VPS8-225ENST00000492449 PAQR8Q8TEZ7 354 aa8.96□□□□□ -0.97
VPS8-225ENST00000492449 RAB40AQ8WXH6 277 aa8.96□□□□□ -0.97
VPS8-225ENST00000492449 S100PBPQ96BU1 408 aa8.96□□□□□ -0.97
VPS8-225ENST00000492449 MRI1Q9BV20 369 aa8.96□□□□□ -0.97
VPS8-225ENST00000492449 LINC00597Q9H2U6 94 aa8.96□□□□□ -0.97
VPS8-225ENST00000492449 APMAPQ9HDC9 416 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms