RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 PGGHGQ32M88 737 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 ARHGAP11BQ3KRB8 267 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 AGAP6Q5VW22 663 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 IL23RQ5VWK5 629 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 PODNL1Q6PEZ8 512 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 TMPPEQ6ZT21 453 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 EIF3MQ7L2H7 374 aaKnown RBP8.08□□□□□ -1.12
HDAC3-212ENST00000492407 MTDHQ86UE4 582 aaKnown RBP8.08□□□□□ -1.12
HDAC3-212ENST00000492407 HIPK1Q86Z02 1210 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 LRRC34Q8IZ02 419 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 KIRREL3Q8IZU9 778 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 C4orf33Q8N1A6 199 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 FNDC5Q8NAU1 212 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 LRRN4CLQ8ND94 238 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 UBLCP1Q8WVY7 318 aaPredicted RBP8.08□□□□□ -1.12
HDAC3-212ENST00000492407 ITPKCQ96DU7 683 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 ZHX1-C8orf76Q96EF9 292 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 ADAD1Q96M93 576 aaKnown RBP8.08□□□□□ -1.12
HDAC3-212ENST00000492407 OR7D2Q96RA2 312 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 GAL3ST1Q99999 423 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 KLHDC3Q9BQ90 382 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 TRAF4Q9BUZ4 470 aaPredicted RBP8.08□□□□□ -1.12
HDAC3-212ENST00000492407 DUSP26Q9BV47 211 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 ALG2Q9H553 416 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 ACER3Q9NUN7 267 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 EXD2Q9NVH0 621 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 CISD1Q9NZ45 108 aaKnown RBP8.08□□□□□ -1.12
HDAC3-212ENST00000492407 NDUFA13Q9P0J0 144 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 CRNNQ9UBG3 495 aaPredicted RBP8.08□□□□□ -1.12
HDAC3-212ENST00000492407 ADAM21Q9UKJ8 722 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 SLC35A3Q9Y2D2 325 aa8.08□□□□□ -1.12
HDAC3-212ENST00000492407 CAB39Q9Y376 341 aaPredicted RBP8.08□□□□□ -1.12
HDAC3-212ENST00000492407 DSCAMO60469 2012 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 OR5H1A6NKK0 313 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 SHISA9B4DS77 424 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 RNF223E7ERA6 249 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 RNASET2O00584 256 aaKnown RBP8.07□□□□□ -1.12
HDAC3-212ENST00000492407 OIP5O43482 229 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 PMS2P2O95744 297 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 C6orf47O95873 294 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 CD8AP01732 235 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 IGHV4-39P01824 125 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 CHRNGP07510 517 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 MATN1P21941 496 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 PTAFRP25105 342 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 SLC16A1P53985 500 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 TAGLNQ01995 201 aaKnown RBP8.07□□□□□ -1.12
HDAC3-212ENST00000492407 SKP2Q13309 424 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 PTGR1Q14914 329 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 TOMM34Q15785 309 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-212ENST00000492407 STK11Q15831 433 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 TIGD2Q4W5G0 525 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 SYT14P1Q58G82 188 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 KRBOX4Q5JUW0 171 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 FBXW9Q5XUX1 488 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 ABLIM2Q6H8Q1 611 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 OR7E24Q6IFN5 339 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 KLHL17Q6TDP4 642 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 TMEM108Q6UXF1 575 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 C6orf120Q7Z4R8 191 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 ZNF100Q8IYN0 542 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 DEPDC4Q8N2C3 294 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 OR8J2Q8NGG1 315 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 OTUB1Q96FW1 271 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-212ENST00000492407 MED30Q96HR3 178 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 CEP19Q96LK0 163 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 HS6ST2Q96MM7 605 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 RHNO1Q9BSD3 238 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 THUMPD3Q9BV44 507 aaKnown RBP8.07□□□□□ -1.12
HDAC3-212ENST00000492407 ROPN1BQ9BZX4 212 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-212ENST00000492407 ZNF350Q9GZX5 532 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 SAP130Q9H0E3 1048 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 C12orf65Q9H3J6 166 aaKnown RBP8.07□□□□□ -1.12
HDAC3-212ENST00000492407 ANKZF1Q9H8Y5 726 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 ROPN1Q9HAT0 212 aaPredicted RBP8.07□□□□□ -1.12
HDAC3-212ENST00000492407 EXOSC3Q9NQT5 275 aaKnown RBP8.07□□□□□ -1.12
HDAC3-212ENST00000492407 MRGBPQ9NV56 204 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 TBCCD1Q9NVR7 557 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 PARPBPQ9NWS1 579 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 TMEM160Q9NX00 188 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 NOP53Q9NZM5 478 aaKnown RBP8.07□□□□□ -1.12
HDAC3-212ENST00000492407 PCDHGB4Q9UN71 923 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 TRAPPC4Q9Y296 219 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 FIS1Q9Y3D6 152 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 HDGFL3Q9Y3E1 203 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 KCNE3Q9Y6H6 103 aa8.07□□□□□ -1.12
HDAC3-212ENST00000492407 FBN1P35555 2871 aaKnown RBP8.07□□□□□ -1.12
HDAC3-212ENST00000492407 TRAV6A0A075B6T7 132 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 TMEM233B4DJY2 109 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 SULT2B1O00204 365 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 EBAG9O00559 213 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 CFLARO15519 480 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 MGRN1O60291 552 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 FCMRO60667 390 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 UGT2B17O75795 530 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 H6PDO95479 791 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 CSTAP01040 98 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 BMP4P12644 408 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 ATP6V1B1P15313 513 aa8.06□□□□□ -1.12
HDAC3-212ENST00000492407 EFNA1P20827 205 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms