RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 GPR107Q5VW38 600 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 FAM45BPQ6NSW5 357 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 H3F3CQ6NXT2 135 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 CDC42EP5Q6NZY7 148 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 SLC39A4Q6P5W5 647 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 ZNF773Q6PK81 442 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 PRSS55Q6UWB4 352 aaPredicted RBP4.32□□□□□ -1.72
RTN4-215ENST00000491592 LCTLQ6UWM7 567 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 PIP4P1Q86T03 277 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 IGFN1Q86VF2 1251 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 SLC22A16Q86VW1 577 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 ZC3HC1Q86WB0 502 aaKnown RBP4.32□□□□□ -1.72
RTN4-215ENST00000491592 DHFR2Q86XF0 187 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 LACC1Q8IV20 430 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 MMAAQ8IVH4 418 aaKnown RBP4.32□□□□□ -1.72
RTN4-215ENST00000491592 ZNF786Q8N393 782 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 DHRSXQ8N5I4 330 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 NANOGP1Q8N7R0 232 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 ATP6V0D2Q8N8Y2 350 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 BEST2Q8NFU1 509 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 OR51L1Q8NGJ5 315 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 C16orf52Q8NHV5 167 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 WDR20Q8TBZ3 569 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 FAM45AQ8TCE6 357 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 TMEM170AQ8WVE7 144 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 FAR1Q8WVX9 515 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 RASSF5Q8WWW0 418 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 HTR3CQ8WXA8 447 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 GTF2H4Q92759 462 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 TAMM41Q96BW9 452 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 ROPN1LQ96C74 230 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 CENPNQ96H22 339 aaPredicted RBP4.32□□□□□ -1.72
RTN4-215ENST00000491592 BTN2A3PQ96KV6 586 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 MARK4Q96L34 752 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 CIB1Q99828 191 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 C7orf50Q9BRJ6 194 aaKnown RBP4.32□□□□□ -1.72
RTN4-215ENST00000491592 TMEM246Q9BRR3 403 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 DCUN1D5Q9BTE7 237 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 ST6GALNAC5Q9BVH7 336 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 CALN1Q9BXU9 219 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 GSDMCQ9BYG8 508 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 SPRTNQ9H040 489 aaPredicted RBP4.32□□□□□ -1.72
RTN4-215ENST00000491592 TPK1Q9H3S4 243 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 ATP13A3Q9H7F0 1226 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 UBTD1Q9HAC8 227 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 ELOVL3Q9HB03 270 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 PLAC1Q9HBJ0 212 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 APOBEC3GQ9HC16 384 aaKnown RBP4.32□□□□□ -1.72
RTN4-215ENST00000491592 MCCC2Q9HCC0 563 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 MYOZ2Q9NPC6 264 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 XPNPEP1Q9NQW7 623 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.32□□□□□ -1.721e-9■■□□□ 13.3
RTN4-215ENST00000491592 ACOXLQ9NUZ1 547 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 DUS2Q9NX74 493 aaKnown RBP4.32□□□□□ -1.72
RTN4-215ENST00000491592 SPHK1Q9NYA1 384 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 ADA2Q9NZK5 511 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 PIPOXQ9P0Z9 390 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 WARS2Q9UGM6 360 aaKnown RBP4.32□□□□□ -1.72
RTN4-215ENST00000491592 CLEC2DQ9UHP7 191 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 DAPK2Q9UIK4 370 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 PITPNC1Q9UKF7 332 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 RPH3ALQ9UNE2 315 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 ICKQ9UPZ9 632 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 PPIAL4AQ9Y536 164 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 WDR81Q562E7 1941 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 PSME4Q14997 1843 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 STRCP1A6NGW2 1772 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 SMCHD1A6NHR9 2005 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 FER1L6Q2WGJ9 1857 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 CNTNAP2Q9UHC6 1331 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 TRBV5-7A0A0A0MS05 114 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 A0A1W2PPC1 479 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 ANKUB1A6NFN9 424 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 A6NNC1 897 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 LRRN3E7EW58 273 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 G3V2L1 256 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 CHEK1O14757 476 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 ZMPSTE24O75844 475 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 SRP72O76094 671 aaKnown RBP4.31□□□□□ -1.72
RTN4-215ENST00000491592 OR2F2O95006 317 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 KRT75O95678 551 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 GPIP06744 558 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 TFPTP0C1Z6 253 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 MBL2P11226 248 aaPredicted RBP4.31□□□□□ -1.72
RTN4-215ENST00000491592 HSD17B1P14061 328 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 UQCRC2P22695 453 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 FASP25445 335 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 GABRA5P31644 462 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 ACTR1BP42025 376 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 TNFRSF4P43489 277 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 KIR3DL2P43630 455 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 SERPINB10P48595 397 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 CCL11P51671 97 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 KPNA2P52292 529 aaKnown RBP4.31□□□□□ -1.72
RTN4-215ENST00000491592 LIMK2P53671 638 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 FKBP1AP62942 108 aaKnown RBP4.31□□□□□ -1.72
RTN4-215ENST00000491592 PPP2R2BQ00005 443 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 MAT1AQ00266 395 aaKnown RBP4.31□□□□□ -1.72
RTN4-215ENST00000491592 SCRN3Q0VDG4 424 aa4.31□□□□□ -1.72
RTN4-215ENST00000491592 PJVKQ0ZLH3 352 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms