RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 PAQR6Q6TCH4 344 aa12.65□□□□□ -0.39
SMPD4-219ENST00000491128 SLC46A3Q7Z3Q1 461 aa12.65□□□□□ -0.39
SMPD4-219ENST00000491128 OR8J1Q8NGP2 316 aa12.65□□□□□ -0.39
SMPD4-219ENST00000491128 THOC3Q96J01 351 aaKnown RBP12.65□□□□□ -0.39
SMPD4-219ENST00000491128 GNRHR2Q96P88 292 aa12.65□□□□□ -0.39
SMPD4-219ENST00000491128 ADAM19Q9H013 955 aa12.65□□□□□ -0.39
SMPD4-219ENST00000491128 TAS2R10Q9NYW0 307 aa12.65□□□□□ -0.39
SMPD4-219ENST00000491128 A6NL46 340 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 H3BML4 177 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 SURF4O15260 269 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 EIF4E2O60573 245 aaKnown RBP12.64□□□□□ -0.39
SMPD4-219ENST00000491128 DKK1O94907 266 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 PGCP20142 388 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 AQP2P41181 271 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 C19orf57Q0VDD7 668 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 NTRK2Q16620 822 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 ZBED5Q49AG3 693 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 PLBD1Q6P4A8 553 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 ADGRG3Q86Y34 549 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 CLVS1Q8IUQ0 354 aaPredicted RBP12.64□□□□□ -0.39
SMPD4-219ENST00000491128 CPOQ8IVL8 374 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 KDM8Q8N371 416 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 STX19Q8N4C7 294 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 ZNF582Q96NG8 517 aaPredicted RBP12.64□□□□□ -0.39
SMPD4-219ENST00000491128 CLEC2DQ9UHP7 191 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 CEP295Q9C0D2 2601 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 A0A0G2JMM0 328 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 A0A1W2PPB8 328 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 A0A1W2PRS3 328 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 TMEM72A0PK05 275 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 TRIM64CA6NLI5 447 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 KIR3DP1A8MWS1 328 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 BHLHE40O14503 412 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 TERTO14746 1132 aaKnown RBP12.64□□□□□ -0.39
SMPD4-219ENST00000491128 SUSD5O60279 629 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 RAB40ALP0C0E4 278 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 PRKAR1AP10644 381 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 NOS3P29474 1203 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 RPL4P36578 427 aaKnown RBP12.64□□□□□ -0.39
SMPD4-219ENST00000491128 TMED10P49755 219 aaKnown RBP12.64□□□□□ -0.39
SMPD4-219ENST00000491128 SSR4P51571 173 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 CXCR4P61073 352 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 EFNB1P98172 346 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 ROR2Q01974 943 aaKnown RBP12.64□□□□□ -0.39
SMPD4-219ENST00000491128 C17orf67Q0P5P2 114 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 ZSWIM7Q19AV6 140 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 NUP54Q7Z3B4 507 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 GPR141Q7Z602 305 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 OR52L1Q8NGH7 329 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 OR51L1Q8NGJ5 315 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 FAR1Q8WVX9 515 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 SLC35B4Q969S0 331 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 PLEKHA8Q96JA3 519 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 PRRX2Q99811 253 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 POLDIP3Q9BY77 421 aaKnown RBP12.64□□□□□ -0.39
SMPD4-219ENST00000491128 HINT3Q9NQE9 182 aaKnown RBP12.64□□□□□ -0.39
SMPD4-219ENST00000491128 CEPT1Q9Y6K0 416 aa12.64□□□□□ -0.39
SMPD4-219ENST00000491128 TMED7-TICAM2A0A0A6YYA0 188 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 RBM34P42696 430 aaKnown RBP12.63□□□□□ -0.39
SMPD4-219ENST00000491128 SLC16A1P53985 500 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 ERVK-25P63136 954 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 ZNF91Q05481 1191 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 FOXF1Q12946 379 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 GALNT15Q8N3T1 639 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 WDSUB1Q8N9V3 476 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 OR4K13Q8NH42 304 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 ARL5BQ96KC2 179 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 ERMAPQ96PL5 475 aaPredicted RBP12.63□□□□□ -0.39
SMPD4-219ENST00000491128 FN3KQ9H479 309 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 SLC25A19Q9HC21 320 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 NANSQ9NR45 359 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 TUBA8Q9NY65 449 aaPredicted RBP12.63□□□□□ -0.39
SMPD4-219ENST00000491128 DLL3Q9NYJ7 618 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 WARS2Q9UGM6 360 aaKnown RBP12.63□□□□□ -0.39
SMPD4-219ENST00000491128 YARS2Q9Y2Z4 477 aaKnown RBP12.63□□□□□ -0.39
SMPD4-219ENST00000491128 TMED7Q9Y3B3 224 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 WIF1Q9Y5W5 379 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 C11orf98E9PRG8 122 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 TM4SF5O14894 197 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 SPINK2P20155 84 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 PSMB9P28065 219 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 RBMS1P29558 406 aaKnown RBP12.63□□□□□ -0.39
SMPD4-219ENST00000491128 SLC6A8P48029 635 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 GP2P55259 537 aaKnown RBP12.63□□□□□ -0.39
SMPD4-219ENST00000491128 MLF1P58340 268 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 GABARAPL2P60520 117 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 SNRPGP62308 76 aaKnown RBP12.63□□□□□ -0.39
SMPD4-219ENST00000491128 FOXK2Q01167 660 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 ZNF74Q16587 644 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 EML6Q6ZMW3 1958 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 ANKK1Q8NFD2 765 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 TMEM163Q8TC26 289 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 FGF11Q92914 225 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 SLC38A2Q96QD8 506 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 TAPBPLQ9BX59 468 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 RBM38Q9H0Z9 239 aaKnown RBP12.63□□□□□ -0.39
SMPD4-219ENST00000491128 OR51V1Q9H2C8 321 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 GPN2Q9H9Y4 310 aaPredicted RBP12.63□□□□□ -0.39
SMPD4-219ENST00000491128 HPF1Q9NWY4 346 aa12.63□□□□□ -0.39
SMPD4-219ENST00000491128 MED13Q9UHV7 2174 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms