RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 NDUFAF1Q9Y375 327 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 CSPG4Q6UVK1 2322 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 USF3Q68DE3 2245 aa9.23□□□□□ -0.93
TTC28-207ENST00000490475 TRBV5-3A0A0A0MS03 114 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 LOC100653049A0A140TA62 436 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 CLDN24A6NM45 220 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 H7C1Q1 480 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 FBP2O00757 339 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 ANGPT2O15123 496 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 ZNF264O43296 627 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 KIAA0513O60268 411 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 BCAS1O75363 584 aaPredicted RBP9.22□□□□□ -0.93
TTC28-207ENST00000490475 CYP7B1O75881 506 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 KRT34O76011 436 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 GUSBP08236 651 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 UBL4AP11441 157 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 LOXP28300 417 aaPredicted RBP9.22□□□□□ -0.93
TTC28-207ENST00000490475 SFTPDP35247 375 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 ANXA11P50995 505 aaKnown RBP9.22□□□□□ -0.93
TTC28-207ENST00000490475 DSTNP60981 165 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 NCALDP61601 193 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 RPS4XP62701 263 aaKnown RBP9.22□□□□□ -0.93
TTC28-207ENST00000490475 CSNK2A1P68400 391 aaPredicted RBP9.22□□□□□ -0.93
TTC28-207ENST00000490475 TXNL4AP83876 142 aaKnown RBP9.22□□□□□ -0.93
TTC28-207ENST00000490475 FOXF1Q12946 379 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 KLF10Q13118 480 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 ITGADQ13349 1161 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 RUNDC3AQ59EK9 446 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 SLC25A53Q5H9E4 307 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 SFRP5Q5T4F7 317 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 ANKRD34AQ69YU3 496 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 LRRC74BQ6ZQY2 392 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 EIF3MQ7L2H7 374 aaKnown RBP9.22□□□□□ -0.93
TTC28-207ENST00000490475 P2RY8Q86VZ1 359 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 WFDC8Q8IUA0 241 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 ZNF619Q8N2I2 560 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 FBXO27Q8NI29 283 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 GPR119Q8TDV5 335 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 SLC25A43Q8WUT9 341 aaPredicted RBP9.22□□□□□ -0.93
TTC28-207ENST00000490475 ST8SIA1Q92185 356 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 KISS1RQ969F8 398 aaPredicted RBP9.22□□□□□ -0.93
TTC28-207ENST00000490475 MAL2Q969L2 176 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 FBXW5Q969U6 566 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 HS3ST6Q96QI5 342 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 POTEKPQ9BYX7 375 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 IKZF5Q9H5V7 419 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 TMEM185BQ9H7F4 350 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 POLE3Q9NRF9 147 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 FAIMQ9NVQ4 179 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 ARMCX1Q9P291 453 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 LEF1Q9UJU2 399 aaPredicted RBP9.22□□□□□ -0.93
TTC28-207ENST00000490475 CLEC4AQ9UMR7 237 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 RNF115Q9Y4L5 304 aa9.22□□□□□ -0.93
TTC28-207ENST00000490475 SPIN1Q9Y657 262 aaPredicted RBP9.22□□□□□ -0.93
TTC28-207ENST00000490475 ETV2O00321 342 aaPredicted RBP9.21□□□□□ -0.94
TTC28-207ENST00000490475 EFNA2O43921 213 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 UBOX5O94941 541 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 LY6G6DO95868 133 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 CSTAP01040 98 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 BCHEP06276 602 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 THBDP07204 575 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 CD3EP07766 207 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 UBTFL6P0CB48 400 aaPredicted RBP9.21□□□□□ -0.94
TTC28-207ENST00000490475 PRKCAP17252 672 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 PGCP20142 388 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 MAGEA8P43361 318 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 ATP5J2P56134 94 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 KCNJ10P78508 379 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 HPCAP84074 193 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 TMEM176BQ3YBM2 270 aaPredicted RBP9.21□□□□□ -0.94
TTC28-207ENST00000490475 RPS26P11Q5JNZ5 115 aaPredicted RBP9.21□□□□□ -0.94
TTC28-207ENST00000490475 C1QTNF12Q5T7M4 302 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 TFAP2EQ6VUC0 442 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 Q6ZT83 130 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 DHDDSQ86SQ9 333 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 GABRG1Q8N1C3 465 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 DPP10Q8N608 796 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 TMCO5AQ8N6Q1 288 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 POC1BQ8TC44 478 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 TSPEARQ8WU66 669 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 ROBO4Q8WZ75 1007 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 MUCL1Q96DR8 90 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 ZHX1-C8orf76Q96EF9 292 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 TMEM19Q96HH6 336 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 RADILQ96JH8 1075 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 THUMPD3Q9BV44 507 aaKnown RBP9.21□□□□□ -0.94
TTC28-207ENST00000490475 LAT2Q9GZY6 243 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 LRMDAQ9H2I8 198 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 C12orf49Q9H741 205 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 BCO1Q9HAY6 547 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 EMC3Q9P0I2 261 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 P2RX2Q9UBL9 471 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.21□□□□□ -0.94
TTC28-207ENST00000490475 FREM1Q5H8C1 2179 aa9.21□□□□□ -0.94
TTC28-207ENST00000490475 FN1P02751 2386 aaKnown RBP9.2□□□□□ -0.94
TTC28-207ENST00000490475 VPS13CQ709C8 3753 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 AGAP5A6NIR3 686 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 ZNF724A8MTY0 619 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 DNPH1O43598 174 aa9.2□□□□□ -0.94
TTC28-207ENST00000490475 GCM2O75603 506 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms