RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 MAGEB18Q96M61 343 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 ZNF578Q96N58 590 aaPredicted RBP2.52□□□□□ -2.01
UBXN4-208ENST00000490163 LRRN3Q9H3W5 708 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 CSNK1G1Q9HCP0 422 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 RPRD1BQ9NQG5 326 aaKnown RBP2.52□□□□□ -2.01
UBXN4-208ENST00000490163 MRPL39Q9NYK5 338 aaKnown RBP2.52□□□□□ -2.01
UBXN4-208ENST00000490163 SNX6Q9UNH7 406 aa2.52□□□□□ -2.01
UBXN4-208ENST00000490163 IGLV5-37A0A075B6J1 123 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 SMCO2A6NFE2 343 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 A8MX80 341 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 WRBO00258 174 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 ZNHIT1O43257 154 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 AKR7A2O43488 359 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 SULT1B1O43704 296 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 RANBP6O60518 1105 aaKnown RBP2.51□□□□□ -2.01
UBXN4-208ENST00000490163 MTX2O75431 263 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 LYPD3O95274 346 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 PRF1P14222 555 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 B4GALT1P15291 398 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 SERPINB1P30740 379 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 LONP1P36776 959 aaKnown RBP2.51□□□□□ -2.01
UBXN4-208ENST00000490163 PTGDSP41222 190 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 CBX5P45973 191 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 CDK9P50750 372 aaKnown RBP2.51□□□□□ -2.01
UBXN4-208ENST00000490163 NLRP11P59045 1033 aaKnown RBP2.51□□□□□ -2.01
UBXN4-208ENST00000490163 KRTAP10-2P60368 255 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 STX3Q13277 289 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 CCDC58Q4VC31 144 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 CLVS2Q5SYC1 327 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 PRR5LQ6MZQ0 368 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 FAHD2BQ6P2I3 314 aaPredicted RBP2.51□□□□□ -2.01
UBXN4-208ENST00000490163 CORO6Q6QEF8 472 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 APTXQ7Z2E3 356 aaKnown RBP2.51□□□□□ -2.01
UBXN4-208ENST00000490163 TRMT11Q7Z4G4 463 aaKnown RBP2.51□□□□□ -2.01
UBXN4-208ENST00000490163 DHDDSQ86SQ9 333 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 RNF113BQ8IZP6 322 aaKnown RBP2.51□□□□□ -2.01
UBXN4-208ENST00000490163 CRYBG2Q8N1P7 616 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 MFSD9Q8NBP5 474 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 SYT8Q8NBV8 401 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 HCAR2Q8TDS4 363 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 ESR2Q92731 530 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 FAHD2AQ96GK7 314 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 NSL1Q96IY1 281 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 OR2B2Q9GZK3 357 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 RNF41Q9H4P4 317 aaPredicted RBP2.51□□□□□ -2.01
UBXN4-208ENST00000490163 KRCC1Q9NPI7 259 aaPredicted RBP2.51□□□□□ -2.01
UBXN4-208ENST00000490163 CDH9Q9ULB4 789 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.51□□□□□ -2.01
UBXN4-208ENST00000490163 TIMM10BQ9Y5J6 103 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 MYH11P35749 1972 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 IGHV4-61A0A0C4DH41 118 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 PVALEFA0A1B0GWK0 134 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 HEATR9A2RTY3 570 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 FAM172BPA6NC97 362 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 EVPLLA8MZ36 301 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 ITM2AO43736 263 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 SRPX2O60687 465 aaPredicted RBP2.51□□□□□ -2.01
UBXN4-208ENST00000490163 NXPH4O95158 308 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 BMP10O95393 424 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 TMEM50AO95807 157 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 IGHV4-59P01825 116 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 MCF2P10911 925 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 UGT1A4P22310 534 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 TUBG1P23258 451 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 EVI2BP34910 448 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 DDOSTP39656 456 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 MAP3K8P41279 467 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 RPS5P46782 204 aaKnown RBP2.51□□□□□ -2.01
UBXN4-208ENST00000490163 OR3A2P47893 321 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 LMO4P61968 165 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 EXOSC2Q13868 293 aaKnown RBP2.51□□□□□ -2.01
UBXN4-208ENST00000490163 MAPRE2Q15555 327 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 TAB1Q15750 504 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 CD226Q15762 336 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 MOGQ16653 247 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 MICBQ29980 383 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 TMEM52BQ4KMG9 183 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 NDUFAF5Q5TEU4 345 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 DHRS4L2Q6PKH6 230 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 CRIP3Q6Q6R5 217 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 OR6F1Q8NGZ6 308 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 CDC26Q8NHZ8 85 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 OSR1Q8TAX0 266 aaPredicted RBP2.51□□□□□ -2.01
UBXN4-208ENST00000490163 RDH11Q8TC12 318 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 MAGEE2Q8TD90 523 aaPredicted RBP2.51□□□□□ -2.01
UBXN4-208ENST00000490163 SLC38A4Q969I6 547 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 ZNF274Q96GC6 653 aaPredicted RBP2.51□□□□□ -2.01
UBXN4-208ENST00000490163 SERPINB12Q96P63 405 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 DCUN1D5Q9BTE7 237 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 GPR174Q9BXC1 333 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 ZNF717Q9BY31 904 aaPredicted RBP2.51□□□□□ -2.01
UBXN4-208ENST00000490163 ROPN1BQ9BZX4 212 aaPredicted RBP2.51□□□□□ -2.01
UBXN4-208ENST00000490163 FAM49AQ9H0Q0 323 aaPredicted RBP2.51□□□□□ -2.01
UBXN4-208ENST00000490163 C8orf33Q9H7E9 229 aaPredicted RBP2.51□□□□□ -2.01
UBXN4-208ENST00000490163 ATP13A3Q9H7F0 1226 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 RAB18Q9NP72 206 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 TUBG2Q9NRH3 451 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 SMPD4Q9NXE4 827 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 PACSIN3Q9UKS6 424 aa2.51□□□□□ -2.01
UBXN4-208ENST00000490163 MRPS18CQ9Y3D5 142 aaKnown RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms