RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 TMED7-TICAM2A0A0A6YYA0 188 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 RFXANKO14593 260 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 ZNF208O43345 1280 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 FRS3O43559 492 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 SLC22A3O75751 556 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 CYP7B1O75881 506 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 BCHEP06276 602 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 HTR2AP28223 471 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 TACR3P29371 465 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 ADSLP30566 484 aaPredicted RBP10.41□□□□□ -0.74
SRSF4-204ENST00000489898 RYKP34925 604 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 CHI3L1P36222 383 aaPredicted RBP10.41□□□□□ -0.74
SRSF4-204ENST00000489898 APOBEC1P41238 236 aaKnown RBP10.41□□□□□ -0.74
SRSF4-204ENST00000489898 IDH2P48735 452 aaKnown RBP10.41□□□□□ -0.74
SRSF4-204ENST00000489898 TXNL4AP83876 142 aaKnown RBP10.41□□□□□ -0.74
SRSF4-204ENST00000489898 EGR4Q05215 589 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 SLC17A1Q14916 467 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 P2RY6Q15077 328 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 GSTA3Q16772 222 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 GPAT3Q53EU6 434 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 PAGE3Q5JUK9 113 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 TMEM201Q5SNT2 666 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 PDSS1Q5T2R2 415 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 SHEQ5VZ18 495 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 FBXW10Q5XX13 1052 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 C11orf71Q6IPW1 123 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 PRSS57Q6UWY2 283 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 LINGO2Q7L985 606 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 SERPINA11Q86U17 422 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 MTDHQ86UE4 582 aaKnown RBP10.41□□□□□ -0.74
SRSF4-204ENST00000489898 P3H2Q8IVL5 708 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 WDFY1Q8IWB7 410 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 STEAP2Q8NFT2 490 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 TMEM234Q8WY98 164 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 MAL2Q969L2 176 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 C3orf49Q96BT1 292 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 PERPQ96FX8 193 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 Q96MF0 132 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 NELFAQ9H3P2 528 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 LIPT1Q9Y234 373 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 ZNF443Q9Y2A4 671 aaPredicted RBP10.41□□□□□ -0.74
SRSF4-204ENST00000489898 TMED7Q9Y3B3 224 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 HDGFL3Q9Y3E1 203 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 PCDHB14Q9Y5E9 798 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 MAGED1Q9Y5V3 778 aaPredicted RBP10.41□□□□□ -0.74
SRSF4-204ENST00000489898 SLC25A15Q9Y619 301 aa10.41□□□□□ -0.74
SRSF4-204ENST00000489898 IGKV1D-42A0A075B6H8 117 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 LIPT2A6NK58 231 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 SULT2B1O00204 365 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 CASKO14936 926 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 CNOT4O95628 575 aaKnown RBP10.4□□□□□ -0.74
SRSF4-204ENST00000489898 IGHV3-9P01782 118 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 IL6P05231 212 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 HEXAP06865 529 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 INHBBP09529 407 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 PABPC4LP0CB38 370 aaKnown RBP10.4□□□□□ -0.74
SRSF4-204ENST00000489898 GKN3PP0CG01 181 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 SLC1A3P43003 542 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 MAGEA8P43361 318 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 IDH3AP50213 366 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 POLR2JP52435 117 aaKnown RBP10.4□□□□□ -0.74
SRSF4-204ENST00000489898 NR1H2P55055 460 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 PPP2R2AP63151 447 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 ADRM1Q16186 407 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 ATAD3BQ5T9A4 648 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 ZNF621Q6ZSS3 439 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 BHLHA15Q7RTS1 189 aaPredicted RBP10.4□□□□□ -0.74
SRSF4-204ENST00000489898 YTHDF3Q7Z739 585 aaKnown RBP10.4□□□□□ -0.74
SRSF4-204ENST00000489898 BIVMQ86UB2 503 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 DTX2Q86UW9 622 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 ARFGAP2Q8N6H7 521 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 WDR31Q8NA23 367 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 AKAP1Q92667 903 aaKnown RBP eCLIP10.4□□□□□ -0.74
SRSF4-204ENST00000489898 KISS1RQ969F8 398 aaPredicted RBP10.4□□□□□ -0.74
SRSF4-204ENST00000489898 TACO1Q9BSH4 297 aaKnown RBP10.4□□□□□ -0.74
SRSF4-204ENST00000489898 BCL2L10Q9HD36 194 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 A4GALTQ9NPC4 353 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 TIGARQ9NQ88 270 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.4□□□□□ -0.74
SRSF4-204ENST00000489898 VAPAQ9P0L0 249 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 B3GAT1Q9P2W7 334 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 SEC14L4Q9UDX3 406 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 PCDHGB4Q9UN71 923 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 RNF115Q9Y4L5 304 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 MALRD1Q5VYJ5 2156 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 COL6A5A8TX70 2615 aa10.4□□□□□ -0.74
SRSF4-204ENST00000489898 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.4□□□□□ -0.746e-8■■□□□ 14.5
SRSF4-204ENST00000489898 HIVEP2P31629 2446 aa10.39□□□□□ -0.75
SRSF4-204ENST00000489898 FAM234BA2RU67 622 aa10.39□□□□□ -0.75
SRSF4-204ENST00000489898 OR5H1A6NKK0 313 aa10.39□□□□□ -0.75
SRSF4-204ENST00000489898 SLCO1B7G3V0H7 640 aa10.39□□□□□ -0.75
SRSF4-204ENST00000489898 H7C1Q1 480 aa10.39□□□□□ -0.75
SRSF4-204ENST00000489898 TPST2O60704 377 aa10.39□□□□□ -0.75
SRSF4-204ENST00000489898 NDUFS7O75251 213 aa10.39□□□□□ -0.75
SRSF4-204ENST00000489898 SASH3O75995 380 aa10.39□□□□□ -0.75
SRSF4-204ENST00000489898 DBIP07108 87 aaKnown RBP10.39□□□□□ -0.75
SRSF4-204ENST00000489898 ARAFP10398 606 aa10.39□□□□□ -0.75
SRSF4-204ENST00000489898 H2AFXP16104 143 aaPredicted RBP10.39□□□□□ -0.75
SRSF4-204ENST00000489898 FPR1P21462 350 aa10.39□□□□□ -0.75
SRSF4-204ENST00000489898 CLK1P49759 484 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms