RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 GPR157Q5UAW9 335 aa1.6□□□□□ -2.15
CPSF3-205ENST00000489629 TTC23Q5W5X9 447 aa1.6□□□□□ -2.15
CPSF3-205ENST00000489629 CASC1Q6TDU7 716 aa1.6□□□□□ -2.15
CPSF3-205ENST00000489629 ZFP2Q6ZN57 461 aa1.6□□□□□ -2.15
CPSF3-205ENST00000489629 ALLCQ8N6M5 410 aa1.6□□□□□ -2.15
CPSF3-205ENST00000489629 OR51G2Q8NGK0 314 aa1.6□□□□□ -2.15
CPSF3-205ENST00000489629 OR8J1Q8NGP2 316 aa1.6□□□□□ -2.15
CPSF3-205ENST00000489629 ANKRD49Q8WVL7 239 aa1.6□□□□□ -2.15
CPSF3-205ENST00000489629 RDH5Q92781 318 aa1.6□□□□□ -2.15
CPSF3-205ENST00000489629 SH3YL1Q96HL8 342 aaPredicted RBP1.6□□□□□ -2.15
CPSF3-205ENST00000489629 SENP8Q96LD8 212 aa1.6□□□□□ -2.15
CPSF3-205ENST00000489629 AMDHD1Q96NU7 426 aa1.6□□□□□ -2.15
CPSF3-205ENST00000489629 PSKH2Q96QS6 385 aa1.6□□□□□ -2.15
CPSF3-205ENST00000489629 RNF126Q9BV68 326 aa1.6□□□□□ -2.15
CPSF3-205ENST00000489629 GON7Q9BXV9 100 aa1.6□□□□□ -2.15
CPSF3-205ENST00000489629 SRXN1Q9BYN0 137 aa1.6□□□□□ -2.15
CPSF3-205ENST00000489629 SLC17A9Q9BYT1 436 aa1.6□□□□□ -2.15
CPSF3-205ENST00000489629 CHIAQ9BZP6 476 aa1.6□□□□□ -2.15
CPSF3-205ENST00000489629 POLR1EQ9GZS1 481 aaKnown RBP1.6□□□□□ -2.15
CPSF3-205ENST00000489629 MAGT1Q9H0U3 335 aa1.6□□□□□ -2.15
CPSF3-205ENST00000489629 ZNF385DQ9H6B1 395 aa1.6□□□□□ -2.15
CPSF3-205ENST00000489629 FANCFQ9NPI8 374 aa1.6□□□□□ -2.15
CPSF3-205ENST00000489629 AIPL1Q9NZN9 384 aa1.6□□□□□ -2.15
CPSF3-205ENST00000489629 RNF14Q9UBS8 474 aa1.6□□□□□ -2.15
CPSF3-205ENST00000489629 NPIPA1Q9UND3 350 aa1.6□□□□□ -2.15
CPSF3-205ENST00000489629 ASB3Q9Y575 518 aa1.6□□□□□ -2.15
CPSF3-205ENST00000489629 PHF3Q92576 2039 aaKnown RBP1.6□□□□□ -2.15
CPSF3-205ENST00000489629 IGHV7-81A0A0B4J1V7 117 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 A0A0J9YXY3 114 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 GPR89AB7ZAQ6 455 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 K7N7A8 449 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 PRRG1O14668 218 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 TAPBPO15533 448 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 RS1O15537 224 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 PRKYO43930 277 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 GMFGO60234 142 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 MTX2O75431 263 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 UGT2B17O75795 530 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 KIAA0754O94854 1291 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 GPR89BP0CG08 455 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 MMP11P24347 488 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 HTR1EP28566 365 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 AQP1P29972 269 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 EPHX2P34913 555 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 P2RY1P47900 373 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 PRKXP51817 358 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 SLC25A52Q3SY17 297 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 C10orf120Q5SQS8 335 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 ATF7IP2Q5U623 682 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 CENPPQ6IPU0 288 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 KDELC1Q6UW63 502 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 DNM1P46Q6ZS02 220 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 MOB3BQ86TA1 216 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 LCA5Q86VQ0 697 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 TPRA1Q86W33 373 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 SAXO1Q8IYX7 474 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 ZNF683Q8IZ20 524 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 SLC38A6Q8IZM9 456 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 SVOPLQ8N434 492 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 DHRSXQ8N5I4 330 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 KIR3DL3Q8N743 410 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 ANKFN1Q8N957 763 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 SYT14Q8NB59 555 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 CATSPER1Q8NEC5 780 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 STEAP2Q8NFT2 490 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 STXBP6Q8NFX7 210 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 OR1F12Q8NHA8 337 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 PAQR8Q8TEZ7 354 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 RLN3Q8WXF3 142 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 CTNNBL1Q8WYA6 563 aaPredicted RBP1.59□□□□□ -2.15
CPSF3-205ENST00000489629 PELI1Q96FA3 418 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 C7orf34Q96L11 122 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 MBOAT4Q96T53 435 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 ZNF670Q9BS34 389 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 SLC35A5Q9BS91 424 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 NIPSNAP3BQ9BS92 247 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 NAT10Q9H0A0 1025 aaKnown RBP1.59□□□□□ -2.15
CPSF3-205ENST00000489629 NXF5Q9H1B4 397 aaKnown RBP1.59□□□□□ -2.15
CPSF3-205ENST00000489629 RHBGQ9H310 441 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 NANSQ9NR45 359 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 SLC17A5Q9NRA2 495 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 CD274Q9NZQ7 290 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 PIPOXQ9P0Z9 390 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 WARS2Q9UGM6 360 aaKnown RBP1.59□□□□□ -2.15
CPSF3-205ENST00000489629 PCSK1NQ9UHG2 260 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 SNX6Q9UNH7 406 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 ERVW-1Q9UQF0 538 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 MRPS33Q9Y291 106 aaKnown RBP1.59□□□□□ -2.15
CPSF3-205ENST00000489629 MAD1L1Q9Y6D9 718 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 CDH10Q9Y6N8 788 aa1.59□□□□□ -2.15
CPSF3-205ENST00000489629 SCN2AQ99250 2005 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 IGLV4-60A0A075B6I1 120 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.58□□□□□ -2.16
CPSF3-205ENST00000489629 PSMB11A5LHX3 300 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 METTL21EPA6NDL7 271 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 TUBAL3A6NHL2 446 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 VSTM2BA6NLU5 285 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 MAGEB3O15480 346 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 CXCL13O43927 109 aa1.58□□□□□ -2.16
CPSF3-205ENST00000489629 TPST2O60704 377 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms