RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 RIMS3Q9UJD0 308 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 ENPP4Q9Y6X5 453 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 ATRXP46100 2492 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 EML6Q6ZMW3 1958 aa9.28□□□□□ -0.92
SKA1-204ENST00000488454 A0A0B4J2E0 115 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 A0A1B0GX12 115 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 TCRBV5S2A0A599 114 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 DHRS12A0PJE2 317 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 A8MVM7 634 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 EIF1AYO14602 144 aaKnown RBP9.27□□□□□ -0.93
SKA1-204ENST00000488454 ZNF208O43345 1280 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 CHP2O43745 196 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 HOXD4P09016 255 aaPredicted RBP9.27□□□□□ -0.93
SKA1-204ENST00000488454 RAP2AP10114 183 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 NQO1P15559 274 aaKnown RBP9.27□□□□□ -0.93
SKA1-204ENST00000488454 RHCEP18577 417 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 IL11P20809 199 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 PTGER4P35408 488 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 EIF1AXP47813 144 aaKnown RBP9.27□□□□□ -0.93
SKA1-204ENST00000488454 GSK3AP49840 483 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 LHX2P50458 406 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 CARD18P57730 90 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 IGFBP7Q16270 282 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 OCLNQ16625 522 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 TTC33Q6PID6 262 aaPredicted RBP9.27□□□□□ -0.93
SKA1-204ENST00000488454 ESPNLQ6ZVH7 1005 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 RRM2BQ7LG56 351 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 ATG4DQ86TL0 474 aaPredicted RBP9.27□□□□□ -0.93
SKA1-204ENST00000488454 CD163Q86VB7 1156 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 FAM86B1Q8N7N1 296 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 FAM57AQ8TBR7 257 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 SLC38A4Q969I6 547 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 WDYHV1Q96HA8 205 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 MPP4Q96JB8 637 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 KLHL15Q96M94 604 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 OR5B2Q96R09 309 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 ZNF300Q96RE9 604 aaPredicted RBP9.27□□□□□ -0.93
SKA1-204ENST00000488454 BRD7Q9NPI1 651 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 PNPLA3Q9NST1 481 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 PAQR5Q9NXK6 330 aaPredicted RBP9.27□□□□□ -0.93
SKA1-204ENST00000488454 NDUFAF4Q9P032 175 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 SLC7A7Q9UM01 511 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 OSGIN2Q9Y236 505 aa9.27□□□□□ -0.93
SKA1-204ENST00000488454 BSNQ9UPA5 3926 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 A0A087WUJ7 227 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 TRGV8A0A0C4DH27 118 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 TMEM72A0PK05 275 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 J3KTA2 159 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 TNFSF11O14788 317 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 ZNHIT1O43257 154 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 EFNA2O43921 213 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 WDR1O75083 606 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 SYNGR4O95473 234 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 ZNF708P17019 499 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 ERFP50548 548 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 CLDN15P56746 228 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 CLDN20P56880 219 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 CSNK2A1P68400 391 aaPredicted RBP9.26□□□□□ -0.93
SKA1-204ENST00000488454 TRAM2Q15035 370 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 SYT14P1Q58G82 188 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 HBMQ6B0K9 141 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 PPP4R4Q6NUP7 873 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 C5orf46Q6UWT4 87 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 Q6ZPB1 254 aaPredicted RBP9.26□□□□□ -0.93
SKA1-204ENST00000488454 PIWIL3Q7Z3Z3 882 aaKnown RBP9.26□□□□□ -0.93
SKA1-204ENST00000488454 GDF7Q7Z4P5 450 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 BTLAQ7Z6A9 289 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 FGD2Q7Z6J4 655 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 OR2V1Q8NHB1 315 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 ZPLD1Q8TCW7 415 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 STK35Q8TDR2 534 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 PHF10Q8WUB8 498 aaKnown RBP9.26□□□□□ -0.93
SKA1-204ENST00000488454 CANT1Q8WVQ1 401 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 OSTF1Q92882 214 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 UTP4Q969X6 686 aaKnown RBP9.26□□□□□ -0.93
SKA1-204ENST00000488454 RELTQ969Z4 430 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 ZHX1-C8orf76Q96EF9 292 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 C7orf34Q96L11 122 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 HS6ST2Q96MM7 605 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 EPYCQ99645 322 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 PIP5K1AQ99755 562 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 CHID1Q9BWS9 393 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 TAPBPLQ9BX59 468 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 POTEKPQ9BYX7 375 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 PRRG4Q9BZD6 226 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 PRDM14Q9GZV8 571 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 TP63Q9H3D4 680 aaPredicted RBP9.26□□□□□ -0.93
SKA1-204ENST00000488454 RHCGQ9UBD6 479 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 A4GNTQ9UNA3 340 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 ZNF835Q9Y2P0 537 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 HDGFL3Q9Y3E1 203 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 IGSF10Q6WRI0 2623 aa9.26□□□□□ -0.93
SKA1-204ENST00000488454 SETXQ7Z333 2677 aaKnown RBP9.25□□□□□ -0.93
SKA1-204ENST00000488454 A0A0J9YW62 118 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 TCRBV3S1A0A5B6 114 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 SULT2B1O00204 365 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 GNGT2O14610 69 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 ADAMDEC1O15204 470 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 OR2T1O43869 369 aa9.25□□□□□ -0.93
SKA1-204ENST00000488454 KRT36O76013 467 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms