RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 THY1P04216 161 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 IFNW1P05000 195 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 HOXD4P09016 255 aaPredicted RBP9.9□□□□□ -0.82
UBE4B-210ENST00000488228 DIO1P49895 249 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 CDH12P55289 794 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 ZNF239Q16600 458 aaKnown RBP9.9□□□□□ -0.82
UBE4B-210ENST00000488228 SPATS1Q496A3 300 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 IFI44LQ53G44 452 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 WDR88Q6ZMY6 472 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 P4HA3Q7Z4N8 544 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 ARHGAP24Q8N264 748 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 MBD3L2Q8NHZ7 208 aaPredicted RBP9.9□□□□□ -0.82
UBE4B-210ENST00000488228 ADAMTS16Q8TE57 1224 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 SSC4DQ8WTU2 575 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 ITLN2Q8WWU7 325 aaPredicted RBP9.9□□□□□ -0.82
UBE4B-210ENST00000488228 GEMIN6Q8WXD5 167 aaKnown RBP9.9□□□□□ -0.82
UBE4B-210ENST00000488228 OSTF1Q92882 214 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 SDCCAG3Q96C92 435 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 NSMCE2Q96MF7 247 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 UCN2Q96RP3 112 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 BTBD10Q9BSF8 475 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 EVA1AQ9H8M9 152 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 TMEM27Q9HBJ8 222 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 DCAF13Q9NV06 445 aaKnown RBP9.9□□□□□ -0.82
UBE4B-210ENST00000488228 Q9UFV3 132 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 RPS6KA6Q9UK32 745 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 RNF6Q9Y252 685 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 ZNF175Q9Y473 711 aa9.9□□□□□ -0.82
UBE4B-210ENST00000488228 TRAPPC13A5PLN9 417 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 FAM90A27PA6NNH2 459 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 J3KTA2 159 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 hCG_2039718K7EN88 272 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 SULT2B1O00204 365 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 SMAD9O15198 467 aaKnown RBP9.89□□□□□ -0.83
UBE4B-210ENST00000488228 ZNF208O43345 1280 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 DNAJC8O75937 253 aaPredicted RBP9.89□□□□□ -0.83
UBE4B-210ENST00000488228 PRKD3O94806 890 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 SYNGR4O95473 234 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 IMPDH2P12268 514 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 FUT4P22083 530 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 IDUAP35475 653 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 YAP1P46937 504 aaKnown RBP9.89□□□□□ -0.83
UBE4B-210ENST00000488228 CARD18P57730 90 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 TAS2R41P59536 307 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 MS4A2Q01362 244 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 EGR4Q05215 589 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 FOXF2Q12947 444 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 FOXD4Q12950 439 aaPredicted RBP9.89□□□□□ -0.83
UBE4B-210ENST00000488228 SF3B4Q15427 424 aaKnown RBP eCLIP9.89□□□□□ -0.834e-8■■■■■ 30.2
UBE4B-210ENST00000488228 PDSS1Q5T2R2 415 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 RIPPLY2Q5TAB7 128 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 C1orf140Q5VVS0 124 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 TMEM211Q6ICI0 200 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 MTFR2Q6P444 385 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 ZNF613Q6PF04 617 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 ULK3Q6PHR2 472 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 FKBP9P1Q75LS8 142 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 GDF7Q7Z4P5 450 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 ABHD3Q8WU67 409 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 DNAJA4Q8WW22 397 aaPredicted RBP9.89□□□□□ -0.83
UBE4B-210ENST00000488228 ROBO4Q8WZ75 1007 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 RND1Q92730 232 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 WNT2BQ93097 391 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 CPNE4Q96A23 557 aaPredicted RBP9.89□□□□□ -0.83
UBE4B-210ENST00000488228 INTS12Q96CB8 462 aaKnown RBP9.89□□□□□ -0.83
UBE4B-210ENST00000488228 DDIT4LQ96D03 193 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 PRRC1Q96M27 445 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 CADM1Q9BY67 442 aaKnown RBP9.89□□□□□ -0.83
UBE4B-210ENST00000488228 AMBRA1Q9C0C7 1298 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 LRMDAQ9H2I8 198 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 GORASP2Q9H8Y8 452 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 CALHM2Q9HA72 323 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 SELENONQ9NZV5 590 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.89□□□□□ -0.83
UBE4B-210ENST00000488228 MCTS1Q9ULC4 181 aaKnown RBP9.89□□□□□ -0.83
UBE4B-210ENST00000488228 SLC7A7Q9UM01 511 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 CLEC4AQ9UMR7 237 aa9.89□□□□□ -0.83
UBE4B-210ENST00000488228 SAMD4AQ9UPU9 718 aaKnown RBP9.89□□□□□ -0.83
UBE4B-210ENST00000488228 A1L4Q6 167 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 A8MVM7 634 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 ZNF814B7Z6K7 855 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 KPNA4O00629 521 aaPredicted RBP9.88□□□□□ -0.83
UBE4B-210ENST00000488228 CHP2O43745 196 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 AHSA1O95433 338 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 PMS2P2O95744 297 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 SEMG1P04279 462 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 TMIGD3P0DMS9 266 aaPredicted RBP9.88□□□□□ -0.83
UBE4B-210ENST00000488228 PNMTP11086 282 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 FCGR2AP12318 317 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 ENPP1P22413 925 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 CEACAM8P31997 349 aaPredicted RBP9.88□□□□□ -0.83
UBE4B-210ENST00000488228 TIMP3P35625 211 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 RPS5P46782 204 aaKnown RBP9.88□□□□□ -0.83
UBE4B-210ENST00000488228 AGFG1P52594 562 aaKnown RBP9.88□□□□□ -0.83
UBE4B-210ENST00000488228 SMSP52788 366 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 OR2B6P58173 313 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 SIRPAP78324 504 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 VLDLRP98155 873 aa9.88□□□□□ -0.83
UBE4B-210ENST00000488228 PIN1Q13526 163 aaPredicted RBP9.88□□□□□ -0.83
UBE4B-210ENST00000488228 TRIM25Q14258 630 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms