RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 NT5EP21589 574 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 TBXA2RP21731 343 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 PAX7P23759 505 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 COX7A1P24310 79 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 CD80P33681 288 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 MDH1P40925 334 aaKnown RBP1.37□□□□□ -2.19
SMC4-220ENST00000488017 TFPI2P48307 235 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 ACADVLP49748 655 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 PLK1P53350 603 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 BIDP55957 195 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 MAP2K1Q02750 393 aaPredicted RBP1.37□□□□□ -2.19
SMC4-220ENST00000488017 CCDC173Q0VFZ6 552 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 GGTLC2Q14390 218 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 DNAJC21Q5F1R6 531 aaKnown RBP1.37□□□□□ -2.19
SMC4-220ENST00000488017 PAGE3Q5JUK9 113 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 KCNIP4Q6PIL6 250 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 CCDC137Q6PK04 289 aaKnown RBP1.37□□□□□ -2.19
SMC4-220ENST00000488017 AFTPHQ6ULP2 937 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 ACOT7LQ6ZUV0 252 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 ACOT1Q86TX2 421 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 ZSCAN30Q86W11 494 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 TPRA1Q86W33 373 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 SLC38A6Q8IZM9 456 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 SVOPLQ8N434 492 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 OR56B4Q8NH76 319 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 CHCHD10Q8WYQ3 142 aaPredicted RBP1.37□□□□□ -2.19
SMC4-220ENST00000488017 OSTF1Q92882 214 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 GAL3ST1Q99999 423 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 NRIP2Q9BQI9 281 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 THUMPD2Q9BTF0 503 aaKnown RBP1.37□□□□□ -2.19
SMC4-220ENST00000488017 SPATA16Q9BXB7 569 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 NAT10Q9H0A0 1025 aaKnown RBP1.37□□□□□ -2.19
SMC4-220ENST00000488017 TMEM117Q9H0C3 514 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 NXF5Q9H1B4 397 aaKnown RBP1.37□□□□□ -2.19
SMC4-220ENST00000488017 VCPKMTQ9H867 229 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 SLC25A22Q9H936 323 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 PLGRKTQ9HBL7 147 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 EML4Q9HC35 981 aaKnown RBP1.37□□□□□ -2.19
SMC4-220ENST00000488017 POLE3Q9NRF9 147 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 C6orf203Q9P0P8 240 aaPredicted RBP1.37□□□□□ -2.19
SMC4-220ENST00000488017 UGT2A1Q9Y4X1 527 aa1.37□□□□□ -2.19
SMC4-220ENST00000488017 IGKV1D-8A0A087WSZ0 117 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 A0A096LNJ9 63 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 GSAPA4D1B5 854 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 PPIAL4DF5H284 164 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 MAPK13O15264 365 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 MSH4O15457 936 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 RS1O15537 224 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 PRKYO43930 277 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 ZNF780AO75290 641 aaPredicted RBP1.36□□□□□ -2.19
SMC4-220ENST00000488017 UGT2B17O75795 530 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 SLC25A27O95847 323 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 LGI1O95970 557 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 LALBAP00709 142 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 EPB41P11171 864 aaKnown RBP1.36□□□□□ -2.19
SMC4-220ENST00000488017 KRT13P13646 458 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 ATP6V1B2P21281 511 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 DRD5P21918 477 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 UQCRC2P22695 453 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 HTR2AP28223 471 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 CA8P35219 290 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 LEPP41159 167 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 PRKXP51817 358 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 SH3BGRP55822 239 aaPredicted RBP1.36□□□□□ -2.19
SMC4-220ENST00000488017 RPS14P62263 151 aaKnown RBP1.36□□□□□ -2.19
SMC4-220ENST00000488017 TGFBR3Q03167 851 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 CSTF1Q05048 431 aaKnown RBP1.36□□□□□ -2.19
SMC4-220ENST00000488017 CHRNB3Q05901 458 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 TRIM16LQ309B1 348 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 TP53I3Q53FA7 332 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 CCDC92Q53HC0 331 aaPredicted RBP1.36□□□□□ -2.19
SMC4-220ENST00000488017 FAM71E1Q6IPT2 247 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 PYHIN1Q6K0P9 492 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 FAM71F2Q6NXP2 309 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 COX15Q7KZN9 410 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 ATP6V0D2Q8N8Y2 350 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 CATSPER1Q8NEC5 780 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 OR10T2Q8NGX3 314 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 OR6X1Q8NH79 312 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 FAM151AQ8WW52 585 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 SPRYD4Q8WW59 207 aaPredicted RBP1.36□□□□□ -2.19
SMC4-220ENST00000488017 FAM3CQ92520 227 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 RAPGEF5Q92565 580 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 AMDHD1Q96NU7 426 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 OR2M2Q96R28 347 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 SCN2AQ99250 2005 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 GPA33Q99795 319 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 PELOQ9BRX2 385 aaKnown RBP1.36□□□□□ -2.19
SMC4-220ENST00000488017 EDEM2Q9BV94 578 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 RHBGQ9H310 441 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 ELOVL3Q9HB03 270 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 TREM2Q9NZC2 230 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 KIF25Q9UIL4 384 aa1.36□□□□□ -2.19
SMC4-220ENST00000488017 PLEKHH1Q9ULM0 1364 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 A0A0G2JLM5 398 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 A0A1B0GUS0 222 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 E7ESA3 106 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 GFYI3L273 518 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 AIREO43918 545 aa1.35□□□□□ -2.19
SMC4-220ENST00000488017 FAM189A1O60320 539 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms