RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 PRSS23O95084 383 aa17.39■□□□□ 0.37
PCOLCE-208ENST00000487172 UMPSP11172 480 aa17.39■□□□□ 0.37
PCOLCE-208ENST00000487172 ITGA2P17301 1181 aa17.39■□□□□ 0.37
PCOLCE-208ENST00000487172 RHCEP18577 417 aa17.39■□□□□ 0.37
PCOLCE-208ENST00000487172 EIF1AXP47813 144 aaKnown RBP17.39■□□□□ 0.37
PCOLCE-208ENST00000487172 CARD18P57730 90 aa17.39■□□□□ 0.37
PCOLCE-208ENST00000487172 RAC3P60763 192 aa17.39■□□□□ 0.37
PCOLCE-208ENST00000487172 EGR4Q05215 589 aa17.39■□□□□ 0.37
PCOLCE-208ENST00000487172 ST3GAL3Q11203 375 aa17.39■□□□□ 0.37
PCOLCE-208ENST00000487172 SGCBQ16585 318 aa17.39■□□□□ 0.37
PCOLCE-208ENST00000487172 TMEM211Q6ICI0 200 aa17.39■□□□□ 0.37
PCOLCE-208ENST00000487172 B3GNT6Q6ZMB0 384 aa17.39■□□□□ 0.37
PCOLCE-208ENST00000487172 PIWIL3Q7Z3Z3 882 aaKnown RBP17.39■□□□□ 0.37
PCOLCE-208ENST00000487172 OSTF1Q92882 214 aa17.39■□□□□ 0.37
PCOLCE-208ENST00000487172 ARL5BQ96KC2 179 aa17.39■□□□□ 0.37
PCOLCE-208ENST00000487172 OR5B2Q96R09 309 aa17.39■□□□□ 0.37
PCOLCE-208ENST00000487172 PRSS27Q9BQR3 290 aa17.39■□□□□ 0.37
PCOLCE-208ENST00000487172 TMEM43Q9BTV4 400 aa17.39■□□□□ 0.37
PCOLCE-208ENST00000487172 ZNF426Q9BUY5 554 aa17.39■□□□□ 0.37
PCOLCE-208ENST00000487172 OR11A1Q9GZK7 315 aa17.39■□□□□ 0.37
PCOLCE-208ENST00000487172 NDUFAF4Q9P032 175 aa17.39■□□□□ 0.37
PCOLCE-208ENST00000487172 CLCF1Q9UBD9 225 aa17.39■□□□□ 0.37
PCOLCE-208ENST00000487172 SH3BGRL2Q9UJC5 107 aa17.39■□□□□ 0.37
PCOLCE-208ENST00000487172 ZNF175Q9Y473 711 aa17.39■□□□□ 0.37
PCOLCE-208ENST00000487172 A0A1W2PNR3 127 aa17.38■□□□□ 0.37
PCOLCE-208ENST00000487172 ZC3H12DA2A288 527 aaKnown RBP17.38■□□□□ 0.37
PCOLCE-208ENST00000487172 CCL21O00585 134 aa17.38■□□□□ 0.37
PCOLCE-208ENST00000487172 DNPH1O43598 174 aa17.38■□□□□ 0.37
PCOLCE-208ENST00000487172 CXCL13O43927 109 aa17.38■□□□□ 0.37
PCOLCE-208ENST00000487172 PMS2P2O95744 297 aa17.38■□□□□ 0.37
PCOLCE-208ENST00000487172 TFPIP10646 304 aa17.38■□□□□ 0.37
PCOLCE-208ENST00000487172 HOXB6P17509 224 aaKnown RBP17.38■□□□□ 0.37
PCOLCE-208ENST00000487172 TIMP3P35625 211 aa17.38■□□□□ 0.37
PCOLCE-208ENST00000487172 CSNK2A1P68400 391 aaPredicted RBP17.38■□□□□ 0.37
PCOLCE-208ENST00000487172 VLDLRP98155 873 aa17.38■□□□□ 0.37
PCOLCE-208ENST00000487172 CYP4Z1Q86W10 505 aa17.38■□□□□ 0.37
PCOLCE-208ENST00000487172 OFCC1Q8IZS5 231 aa17.38■□□□□ 0.37
PCOLCE-208ENST00000487172 WNT2BQ93097 391 aa17.38■□□□□ 0.37
PCOLCE-208ENST00000487172 UTP4Q969X6 686 aaKnown RBP17.38■□□□□ 0.37
PCOLCE-208ENST00000487172 CPNE4Q96A23 557 aaPredicted RBP17.38■□□□□ 0.37
PCOLCE-208ENST00000487172 ZNF845Q96IR2 970 aaPredicted RBP17.38■□□□□ 0.37
PCOLCE-208ENST00000487172 TRIB1Q96RU8 372 aa17.38■□□□□ 0.37
PCOLCE-208ENST00000487172 TTYH2Q9BSA4 534 aa17.38■□□□□ 0.37
PCOLCE-208ENST00000487172 SLC7A7Q9UM01 511 aa17.38■□□□□ 0.37
PCOLCE-208ENST00000487172 FAM32AQ9Y421 112 aaKnown RBP17.38■□□□□ 0.37
PCOLCE-208ENST00000487172 V9GYQ6 96 aa17.38■□□□□ 0.37
PCOLCE-208ENST00000487172 ARHGAP21Q5T5U3 1957 aa17.38■□□□□ 0.37
PCOLCE-208ENST00000487172 PHF3Q92576 2039 aaKnown RBP17.38■□□□□ 0.37
PCOLCE-208ENST00000487172 NBASA2RRP1 2371 aa17.38■□□□□ 0.37
PCOLCE-208ENST00000487172 IGKV1D-42A0A075B6H8 117 aa17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 MBD3L4A6NDZ8 208 aaPredicted RBP17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 MBD3L3A6NE82 208 aaPredicted RBP17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 MBD3L5A6NJ08 208 aaPredicted RBP17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 J3KTA2 159 aa17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 SULT2B1O00204 365 aa17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 FFAR1O14842 300 aa17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 LRRTM2O43300 516 aa17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 MAGEA2P43356 314 aa17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 YAP1P46937 504 aaKnown RBP17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 DIO1P49895 249 aa17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 MYBPHQ13203 477 aa17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 C1orf140Q5VVS0 124 aa17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 MTFR2Q6P444 385 aa17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 TTC33Q6PID6 262 aaPredicted RBP17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 RPTNQ6XPR3 784 aa17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 C3P1Q6ZMU1 363 aa17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 SEM1Q6ZVN7 128 aa17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 PIK3C3Q8NEB9 887 aa17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 OR6S1Q8NH40 331 aa17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 MBD3L2Q8NHZ7 208 aaPredicted RBP17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 RNF217Q8TC41 542 aa17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 HS6ST2Q96MM7 605 aa17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 SEPHS2Q99611 448 aa17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 SLC19A3Q9BZV2 496 aa17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 SLC5A6Q9Y289 635 aa17.37■□□□□ 0.37
PCOLCE-208ENST00000487172 TCRBV3S1A0A5B6 114 aa17.36■□□□□ 0.37
PCOLCE-208ENST00000487172 KDM4EB2RXH2 506 aaPredicted RBP17.36■□□□□ 0.37
PCOLCE-208ENST00000487172 PYCARD-AS1I3L0S3 204 aa17.36■□□□□ 0.37
PCOLCE-208ENST00000487172 OR2T1O43869 369 aa17.36■□□□□ 0.37
PCOLCE-208ENST00000487172 FZD7O75084 574 aa17.36■□□□□ 0.37
PCOLCE-208ENST00000487172 FABP3P05413 133 aa17.36■□□□□ 0.37
PCOLCE-208ENST00000487172 GLI4P10075 376 aa17.36■□□□□ 0.37
PCOLCE-208ENST00000487172 IMPDH2P12268 514 aa17.36■□□□□ 0.37
PCOLCE-208ENST00000487172 IDUAP35475 653 aa17.36■□□□□ 0.37
PCOLCE-208ENST00000487172 RBM34P42696 430 aaKnown RBP17.36■□□□□ 0.37
PCOLCE-208ENST00000487172 CHRNB3Q05901 458 aa17.36■□□□□ 0.37
PCOLCE-208ENST00000487172 ZSCAN26Q16670 478 aa17.36■□□□□ 0.37
PCOLCE-208ENST00000487172 FAM98BQ52LJ0 330 aaKnown RBP17.36■□□□□ 0.37
PCOLCE-208ENST00000487172 WDR88Q6ZMY6 472 aa17.36■□□□□ 0.37
PCOLCE-208ENST00000487172 FJX1Q86VR8 437 aa17.36■□□□□ 0.37
PCOLCE-208ENST00000487172 NKAIN4Q8IVV8 208 aa17.36■□□□□ 0.37
PCOLCE-208ENST00000487172 RPRMLQ8N4K4 120 aa17.36■□□□□ 0.37
PCOLCE-208ENST00000487172 MARVELD2Q8N4S9 558 aa17.36■□□□□ 0.37
PCOLCE-208ENST00000487172 ZNF347Q96SE7 839 aa17.36■□□□□ 0.37
PCOLCE-208ENST00000487172 EPYCQ99645 322 aa17.36■□□□□ 0.37
PCOLCE-208ENST00000487172 TM9SF2Q99805 663 aa17.36■□□□□ 0.37
PCOLCE-208ENST00000487172 FNDC11Q9BVV2 318 aa17.36■□□□□ 0.37
PCOLCE-208ENST00000487172 SRXN1Q9BYN0 137 aa17.36■□□□□ 0.37
PCOLCE-208ENST00000487172 ANKRD19PQ9H560 264 aa17.36■□□□□ 0.37
PCOLCE-208ENST00000487172 MCTS1Q9ULC4 181 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms