RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 ZNF704Q6ZNC4 412 aaPredicted RBP12.77□□□□□ -0.37
CLDN11-207ENST00000486975 GALNT5Q7Z7M9 940 aa12.77□□□□□ -0.37
CLDN11-207ENST00000486975 HMGN2P46Q86SG4 172 aa12.77□□□□□ -0.37
CLDN11-207ENST00000486975 WFDC8Q8IUA0 241 aa12.77□□□□□ -0.37
CLDN11-207ENST00000486975 OR9I1Q8NGQ6 314 aa12.77□□□□□ -0.37
CLDN11-207ENST00000486975 PIGXQ8TBF5 258 aa12.77□□□□□ -0.37
CLDN11-207ENST00000486975 HSD17B8Q92506 261 aa12.77□□□□□ -0.37
CLDN11-207ENST00000486975 GTF2H4Q92759 462 aa12.77□□□□□ -0.37
CLDN11-207ENST00000486975 KISS1RQ969F8 398 aaPredicted RBP12.77□□□□□ -0.37
CLDN11-207ENST00000486975 VPS33AQ96AX1 596 aa12.77□□□□□ -0.37
CLDN11-207ENST00000486975 ARL5BQ96KC2 179 aa12.77□□□□□ -0.37
CLDN11-207ENST00000486975 ZNF300Q96RE9 604 aaPredicted RBP12.77□□□□□ -0.37
CLDN11-207ENST00000486975 CCL19Q99731 98 aa12.77□□□□□ -0.37
CLDN11-207ENST00000486975 UBTD1Q9HAC8 227 aa12.77□□□□□ -0.37
CLDN11-207ENST00000486975 NGBQ9NPG2 151 aa12.77□□□□□ -0.37
CLDN11-207ENST00000486975 TCF7L2Q9NQB0 619 aa12.77□□□□□ -0.37
CLDN11-207ENST00000486975 TMEM45AQ9NWC5 275 aa12.77□□□□□ -0.37
CLDN11-207ENST00000486975 OSGIN1Q9UJX0 560 aa12.77□□□□□ -0.37
CLDN11-207ENST00000486975 ROS1P08922 2347 aa12.77□□□□□ -0.37
CLDN11-207ENST00000486975 MAP1AP78559 2803 aaPredicted RBP12.76□□□□□ -0.37
CLDN11-207ENST00000486975 POLR3GO15318 223 aaPredicted RBP12.76□□□□□ -0.37
CLDN11-207ENST00000486975 EIF1BO60739 113 aaKnown RBP12.76□□□□□ -0.37
CLDN11-207ENST00000486975 ADAP00813 363 aa12.76□□□□□ -0.37
CLDN11-207ENST00000486975 THBS1P07996 1170 aa12.76□□□□□ -0.37
CLDN11-207ENST00000486975 BMP2P12643 396 aa12.76□□□□□ -0.37
CLDN11-207ENST00000486975 HOXB9P17482 250 aaPredicted RBP12.76□□□□□ -0.37
CLDN11-207ENST00000486975 CRATP43155 626 aa12.76□□□□□ -0.37
CLDN11-207ENST00000486975 STX1BP61266 288 aa12.76□□□□□ -0.37
CLDN11-207ENST00000486975 H3F3AP84243 136 aa12.76□□□□□ -0.37
CLDN11-207ENST00000486975 TAB1Q15750 504 aa12.76□□□□□ -0.37
CLDN11-207ENST00000486975 C6orf10Q5SRN2 563 aa12.76□□□□□ -0.37
CLDN11-207ENST00000486975 PRAMEF8Q5VWM4 474 aa12.76□□□□□ -0.37
CLDN11-207ENST00000486975 PRAMEF7Q5VXH5 474 aa12.76□□□□□ -0.37
CLDN11-207ENST00000486975 ADAM5Q6NVV9 412 aa12.76□□□□□ -0.37
CLDN11-207ENST00000486975 PRSS57Q6UWY2 283 aa12.76□□□□□ -0.37
CLDN11-207ENST00000486975 ZNF611Q8N823 705 aa12.76□□□□□ -0.37
CLDN11-207ENST00000486975 LRRC8CQ8TDW0 803 aa12.76□□□□□ -0.37
CLDN11-207ENST00000486975 SLC38A5Q8WUX1 472 aa12.76□□□□□ -0.37
CLDN11-207ENST00000486975 STON2Q8WXE9 905 aa12.76□□□□□ -0.37
CLDN11-207ENST00000486975 PLPPR2Q96GM1 343 aa12.76□□□□□ -0.37
CLDN11-207ENST00000486975 CCDC28BQ9BUN5 200 aa12.76□□□□□ -0.37
CLDN11-207ENST00000486975 OR11A1Q9GZK7 315 aa12.76□□□□□ -0.37
CLDN11-207ENST00000486975 ADAM19Q9H013 955 aa12.76□□□□□ -0.37
CLDN11-207ENST00000486975 TMEM181Q9P2C4 612 aa12.76□□□□□ -0.37
CLDN11-207ENST00000486975 TMED7-TICAM2A0A0A6YYA0 188 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 A0A0G2JPF8 293 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 TMEM247A6NEH6 219 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 HNRNPCL2B2RXH8 293 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 HNRNPCL3B7ZW38 293 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 HNRNPCL1O60812 293 aaKnown RBP12.75□□□□□ -0.37
CLDN11-207ENST00000486975 BCHEP06276 602 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 HNRNPCL4P0DMR1 293 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 PAX1P15863 534 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 NF1P21359 2839 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 TACR3P29371 465 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 FADDQ13158 208 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 GTDC1Q4AE62 458 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 TTMPQ5BVD1 217 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 FREM1Q5H8C1 2179 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 SEZ6L2Q6UXD5 910 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 ZNF836Q6ZNA1 936 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 BHLHA15Q7RTS1 189 aaPredicted RBP12.75□□□□□ -0.37
CLDN11-207ENST00000486975 P2RY8Q86VZ1 359 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 OR52P1PQ8NH57 321 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 SLC35B4Q969S0 331 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 DDIT4LQ96D03 193 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 AURKBQ96GD4 344 aaPredicted RBP12.75□□□□□ -0.37
CLDN11-207ENST00000486975 TMEM19Q96HH6 336 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 GSX2Q9BZM3 304 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 PAIP1Q9H074 479 aaKnown RBP12.75□□□□□ -0.37
CLDN11-207ENST00000486975 RAD21L1Q9H4I0 556 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 BCL2L10Q9HD36 194 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 SLCO1B3Q9NPD5 702 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 PRSS50Q9UI38 385 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 TMED7Q9Y3B3 224 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 GMEB1Q9Y692 573 aa12.75□□□□□ -0.37
CLDN11-207ENST00000486975 A0A096LPI6 279 aa12.74□□□□□ -0.37
CLDN11-207ENST00000486975 HS3ST1O14792 307 aa12.74□□□□□ -0.37
CLDN11-207ENST00000486975 EDNRAP25101 427 aa12.74□□□□□ -0.37
CLDN11-207ENST00000486975 ACAA2P42765 397 aaKnown RBP12.74□□□□□ -0.37
CLDN11-207ENST00000486975 IDH3AP50213 366 aa12.74□□□□□ -0.37
CLDN11-207ENST00000486975 SLC35A1P78382 337 aa12.74□□□□□ -0.37
CLDN11-207ENST00000486975 LARS2Q15031 903 aaKnown RBP12.74□□□□□ -0.37
CLDN11-207ENST00000486975 RGNQ15493 299 aa12.74□□□□□ -0.37
CLDN11-207ENST00000486975 TSC22D1Q15714 1073 aa12.74□□□□□ -0.37
CLDN11-207ENST00000486975 Q5PR19 223 aa12.74□□□□□ -0.37
CLDN11-207ENST00000486975 NCMAPQ5T1S8 102 aa12.74□□□□□ -0.37
CLDN11-207ENST00000486975 LRIF1Q5T3J3 769 aa12.74□□□□□ -0.37
CLDN11-207ENST00000486975 FBXW9Q5XUX1 488 aa12.74□□□□□ -0.37
CLDN11-207ENST00000486975 VRK2Q86Y07 508 aa12.74□□□□□ -0.37
CLDN11-207ENST00000486975 P3H2Q8IVL5 708 aa12.74□□□□□ -0.37
CLDN11-207ENST00000486975 FUNDC1Q8IVP5 155 aa12.74□□□□□ -0.37
CLDN11-207ENST00000486975 ZNF100Q8IYN0 542 aa12.74□□□□□ -0.37
CLDN11-207ENST00000486975 C18orf12Q96KH6 178 aa12.74□□□□□ -0.37
CLDN11-207ENST00000486975 SPATA9Q9BWV2 254 aa12.74□□□□□ -0.37
CLDN11-207ENST00000486975 ESRP2Q9H6T0 727 aaKnown RBP12.74□□□□□ -0.37
CLDN11-207ENST00000486975 A4GALTQ9NPC4 353 aa12.74□□□□□ -0.37
CLDN11-207ENST00000486975 RLIMQ9NVW2 624 aa12.74□□□□□ -0.37
CLDN11-207ENST00000486975 MALT1Q9UDY8 824 aa12.74□□□□□ -0.37
CLDN11-207ENST00000486975 ZNF443Q9Y2A4 671 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms