RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 CYP4Z1Q86W10 505 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 SERPINA12Q8IW75 414 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 GPALPP1Q8IXQ4 340 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 FAM58AQ8N1B3 248 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 KIF2BQ8N4N8 673 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 OR5M9Q8NGP3 310 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 OR6Q1Q8NGQ2 317 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 OR13C3Q8NGS6 347 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 ZNF480Q8WV37 535 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 TSLPQ969D9 159 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 SLC41A3Q96GZ6 507 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 ZNF778Q96MU6 729 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 TSC22D3Q99576 134 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 GPA33Q99795 319 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 C1orf43Q9BWL3 253 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 PCBD2Q9H0N5 130 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 LANCL2Q9NS86 450 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 PLCXD1Q9NUJ7 323 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 CTNNAL1Q9UBT7 734 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 Q9UFV3 132 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 AMFRQ9UKV5 643 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 TCAF1Q9Y4C2 921 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 STAB1Q9NY15 2570 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 EML6Q6ZMW3 1958 aa6.18□□□□□ -1.42
HDAC3-209ENST00000486618 A0A1W2PPV4 95 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 FEZF1A0PJY2 475 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 SAGE2PA6NJ88 616 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 HSPB2A8KAH6 182 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 EFCAB8A8MWE9 144 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 SEC14L5O43304 696 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 MFAP3LO75121 409 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 ITGA10O75578 1167 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 DFFBO76075 338 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 IGHG3P01860 377 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 LPLP06858 475 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 FAM58BPP0C7Q3 252 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 GSTT2P0CG29 244 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 GSTT2BP0CG30 244 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 GABRA1P14867 456 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 PI3P19957 117 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 PIK3R1P27986 724 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 FMO4P31512 558 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 CDC34P49427 236 aaPredicted RBP6.17□□□□□ -1.42
HDAC3-209ENST00000486618 SSR4P51571 173 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 SPCS3P61009 180 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 MRPS25P82663 173 aaKnown RBP6.17□□□□□ -1.42
HDAC3-209ENST00000486618 PPP2R2BQ00005 443 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 TP53BP2Q13625 1128 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 HEPACAMQ14CZ8 416 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 HSPB2Q16082 182 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 PNLIPRP3Q17RR3 467 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 WHAMMP3Q1A5X7 153 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 LSM12Q3MHD2 195 aaKnown RBP6.17□□□□□ -1.42
HDAC3-209ENST00000486618 TTLL9Q3SXZ7 439 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 IFI44LQ53G44 452 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 CTSL3PQ5NE16 218 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 TCHHL1Q5QJ38 904 aaPredicted RBP6.17□□□□□ -1.42
HDAC3-209ENST00000486618 SEL1L2Q5TEA6 688 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 PLCXD3Q63HM9 321 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 CAPN13Q6MZZ7 669 aaPredicted RBP6.17□□□□□ -1.42
HDAC3-209ENST00000486618 MRNIPQ6NTE8 343 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 QSOX2Q6ZRP7 698 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 PEX26Q7Z412 305 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 MDGA2Q7Z553 956 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 LUZP2Q86TE4 346 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 SLC26A11Q86WA9 606 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 PRIMA1Q86XR5 153 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 PDSS2Q86YH6 399 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 PPIL6Q8IXY8 311 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.17□□□□□ -1.42
HDAC3-209ENST00000486618 PPFIBP2Q8ND30 876 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 PSD4Q8NDX1 1056 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 OR9K2Q8NGE7 335 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 SLC44A1Q8WWI5 657 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 RAB1CQ92928 201 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 SARAFQ96BY9 339 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 TM4SF19Q96DZ7 209 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 SIGLEC10Q96LC7 697 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 BIRC8Q96P09 236 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 MACROD1Q9BQ69 325 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 PELOQ9BRX2 385 aaKnown RBP6.17□□□□□ -1.42
HDAC3-209ENST00000486618 SLC22A4Q9H015 551 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 PCDHAC1Q9H158 963 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 LDAHQ9H6V9 325 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 ZDHHC11Q9H8X9 412 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 BEX4Q9NWD9 120 aaPredicted RBP6.17□□□□□ -1.42
HDAC3-209ENST00000486618 MRPL22Q9NWU5 206 aaKnown RBP6.17□□□□□ -1.42
HDAC3-209ENST00000486618 ALKBH4Q9NXW9 302 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 CYB5R1Q9UHQ9 305 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 MAGEL2Q9UJ55 1249 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 YARS2Q9Y2Z4 477 aaKnown RBP6.17□□□□□ -1.42
HDAC3-209ENST00000486618 PCDHA13Q9Y5I0 950 aa6.17□□□□□ -1.42
HDAC3-209ENST00000486618 DNHD1Q96M86 4753 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 TRBV11-1A0A0K0K1C0 115 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 GAGE10A6NGK3 116 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 ZNF860A6NHJ4 632 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 FAM166BA8MTA8 275 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 A8MUA0 341 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 A8MZ25 164 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 PSMD12O00232 456 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms